ggKbase home page

L3_114_000G1_scaffold_1443

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_1443_1
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(198..908)
DNA (711bp) protein (237aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter, ATP-binding protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4U9D5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJP18532.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
L3_114_000G1_scaffold_1443_2
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(917..1669)
DNA (753bp) protein (251aa)
Branched-chain amino acid ABC transporter n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4K751_9FIRM
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:EJP18661.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
ABC transporter
L3_114_000G1_scaffold_1443_3
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1669..2628)
DNA (960bp) protein (320aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4U9L1_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EJP18667.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
ABC transporter permease
L3_114_000G1_scaffold_1443_4
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2636..3517)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XHU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ70141.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
inner-membrane translocator
L3_114_000G1_scaffold_1443_5
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3638..4819)
DNA (1182bp) protein (394aa)
Receptor family ligand-binding protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GI82_9FIRM
Receptor family ligand-binding protein {ECO:0000313|EMBL:EJP18673.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
extracellular ligand-binding receptor
L3_114_000G1_scaffold_1443_6
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5018..6409)
DNA (1392bp) protein (464aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EJP18663.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EJP18663.1};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GI66_9FIRM
glutamate synthase (NADPH), homotetrameric
L3_114_000G1_scaffold_1443_7
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6409..7302)
DNA (894bp) protein (298aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XR90_9FIRM
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:ETO98762.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
L3_114_000G1_scaffold_1443_8
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7443..8468)
DNA (1026bp) protein (342aa)
Carbohydrate kinase, PfkB family n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GB03_9FIRM
Carbohydrate kinase, PfkB family {ECO:0000313|EMBL:EJP18590.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
PfkB domain-containing protein
L3_114_000G1_scaffold_1443_9
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8492..8986)
DNA (495bp) protein (165aa)
Dihydrofolate reductase {ECO:0000313|EMBL:EJP18622.1}; EC=1.5.1.3 {ECO:0000313|EMBL:EJP18622.1};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Dihydrofolate reductase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4U9I5_9FIRM
dihydrofolate reductase subunit
L3_114_000G1_scaffold_1443_10
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8988..9611)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GBC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP18675.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_000G1_scaffold_1443_11
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9598..10044)
DNA (447bp) protein (149aa)
NUDIX domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4U9H1_9FIRM
NUDIX domain protein {ECO:0000313|EMBL:EJP18597.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
ADP-ribose pyrophosphatase
L3_114_000G1_scaffold_1443_12
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10113..12362)
DNA (2250bp) protein (750aa)
Peptidase, U32 family {ECO:0000313|EMBL:EJP18669.1}; EC=3.4.-.- {ECO:0000313|EMBL:EJP18669.1};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TB31_9FIRM
L3_114_000G1_scaffold_1443_13
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12365..13363)
DNA (999bp) protein (333aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GHS0_9FIRM
Holliday junction DNA helicase RuvB
L3_114_000G1_scaffold_1443_14
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13388..13978)
DNA (591bp) protein (197aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GI16_9FIRM
ruvA; Holliday junction DNA helicase RuvA
L3_114_000G1_scaffold_1443_15
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14102..15175
DNA (1074bp) protein (358aa)
Rnase H family n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TB27_9FIRM
Rnase H family {ECO:0000313|EMBL:EJP18659.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
DNA polymerase family B, exonuclease domain.
L3_114_000G1_scaffold_1443_16
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15319..15867)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TAZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP18594.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_000G1_scaffold_1443_17
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16094..16297
DNA (204bp) protein (68aa)
Cold shock-like protein cspLB n=3 Tax=Clostridiales RepID=F3B127_9FIRM
Cold shock protein CspB {ECO:0000313|EMBL:EJP18658.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
cold-shock DNA-binding protein family
L3_114_000G1_scaffold_1443_18
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16365..17249)
DNA (885bp) protein (295aa)
33 kDa chaperonin n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4K734_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Disulfide bond chaperones of the HSP33 family
L3_114_000G1_scaffold_1443_19
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17250..18002)
DNA (753bp) protein (251aa)
Methyltransferase domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GB34_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EJP18615.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_114_000G1_scaffold_1443_20
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18060..18563)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GIB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP18693.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
SEC-C motif domain-containing protein
L3_114_000G1_scaffold_1443_21
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18809..18976
DNA (168bp) protein (56aa)
Ferredoxin n=3 Tax=Clostridiales RepID=F3B131_9FIRM
Ferredoxin {ECO:0000313|EMBL:EJZ70158.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
4Fe-4S binding domain.
L3_114_000G1_scaffold_1443_22
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19081..20412)
DNA (1332bp) protein (444aa)
primary replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XR99_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:EJZ70159.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
L3_114_000G1_scaffold_1443_23
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20412..20858)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=2 Tax=Clostridiales RepID=J5GHN9_9FIRM
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
50S ribosomal protein L9
L3_114_000G1_scaffold_1443_24
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20858..22852)
DNA (1995bp) protein (665aa)
DHHA1 domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4U9K8_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:EJP18662.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
L3_114_000G1_scaffold_1443_25
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23058..23339)
DNA (282bp) protein (94aa)
Putative septation protein SpoVG n=2 Tax=Clostridiales RepID=J4K754_9FIRM
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
Uncharacterized protein, involved in the regulation of septum location
L3_114_000G1_scaffold_1443_26
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23364..24485)
DNA (1122bp) protein (374aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
ADP-glucose pyrophosphorylase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XGG9_9FIRM
L3_114_000G1_scaffold_1443_27
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24482..25756)
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Glucose-1-phosphate adenylyltransferase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GAY7_9FIRM
glucose-1-phosphate adenylyltransferase
L3_114_000G1_scaffold_1443_28
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26100..27491
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4U9F2_9FIRM
L3_114_000G1_scaffold_1443_29
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27517..28593
DNA (1077bp) protein (359aa)
Calcineurin-like phosphoesterase family protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GBA1_9FIRM
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:EJP18660.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
DNA repair exonuclease
L3_114_000G1_scaffold_1443_30
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28590..30455
DNA (1866bp) protein (622aa)
AAA domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4K750_9FIRM
AAA domain protein {ECO:0000313|EMBL:EJP18656.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
Displaying items 1-30 of 34 in total

View Taxonomy