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L3_114_000G1_scaffold_1675

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_1675_1
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..132)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4KA64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETO97087.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
L3_114_000G1_scaffold_1675_2
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(164..400)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=J5GXE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETO97033.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
L3_114_000G1_scaffold_1675_3
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(471..1325)
DNA (855bp) protein (285aa)
Type II secretion system protein F n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TJ16_9FIRM
Type II secretion system protein F {ECO:0000313|EMBL:ETO96949.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
hypothetical protein
L3_114_000G1_scaffold_1675_4
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1330..2133)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5H4C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP23928.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_000G1_scaffold_1675_5
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2133..3371)
DNA (1239bp) protein (413aa)
Type II/IV secretion system protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4UHZ1_9FIRM
Type II/IV secretion system protein {ECO:0000313|EMBL:ETO97042.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
Flp pilus assembly protein, ATPase CpaF
L3_114_000G1_scaffold_1675_6
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4040..4963)
DNA (924bp) protein (308aa)
Cell wall-binding repeat protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GX24_9FIRM
Cell wall-binding repeat protein {ECO:0000313|EMBL:ETO97203.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
choline-binding protein Cbp8
L3_114_000G1_scaffold_1675_7
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5329..6981)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0Y3A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ70400.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
NhaC; Na+/H+ antiporter
L3_114_000G1_scaffold_1675_8
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6997..7521)
DNA (525bp) protein (175aa)
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TGA0_9FIRM
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:EJP22099.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
BtuR; ATP:corrinoid adenosyltransferase
L3_114_000G1_scaffold_1675_9
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7532..8323)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XGC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ70402.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
hypothetical protein
L3_114_000G1_scaffold_1675_10
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8316..9875)
DNA (1560bp) protein (520aa)
D-Lysine 5,6-aminomutase alpha subunit n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4K920_9FIRM
D-Lysine 5,6-aminomutase alpha subunit {ECO:0000313|EMBL:EJP22006.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_000G1_scaffold_1675_11
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9887..11143)
DNA (1257bp) protein (419aa)
Lysine-2,3-aminomutase {ECO:0000313|EMBL:EJP22128.1}; EC=5.4.3.2 {ECO:0000313|EMBL:EJP22128.1};; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
Lysine-2,3-aminomutase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GX32_9FIRM
hypothetical protein
L3_114_000G1_scaffold_1675_12
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11169..12203)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4K917_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP21991.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_000G1_scaffold_1675_13
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12214..13032)
DNA (819bp) protein (273aa)
PF05853 family protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GWT3_9FIRM
PF05853 family protein {ECO:0000313|EMBL:EJP22063.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_000G1_scaffold_1675_14
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13043..13432)
DNA (390bp) protein (130aa)
Thioesterase family protein n=2 Tax=Clostridiales RepID=J4K938_9FIRM
Thioesterase family protein {ECO:0000313|EMBL:EJP22096.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_000G1_scaffold_1675_15
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13694..14854)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XH13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ70408.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
hypothetical protein
L3_114_000G1_scaffold_1675_16
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14867..16315)
DNA (1449bp) protein (483aa)
MutS domain V protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GX72_9FIRM
MutS domain V protein {ECO:0000313|EMBL:EJP22153.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_000G1_scaffold_1675_17
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16317..17330)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GQ38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP22140.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_000G1_scaffold_1675_18
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17330..18229)
DNA (900bp) protein (300aa)
EamA-like transporter family protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TG86_9FIRM
EamA-like transporter family protein {ECO:0000313|EMBL:EJP22064.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_000G1_scaffold_1675_19
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18469..19728
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4K952_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP22166.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
L3_114_000G1_scaffold_1675_20
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19843..20388
DNA (546bp) protein (182aa)
Transcriptional regulator, TetR family n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GPN6_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EJP22025.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
regulatory protein TetR
L3_114_000G1_scaffold_1675_21
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20446..21636)
DNA (1191bp) protein (397aa)
Hydrogenase maturation GTPase HydF n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XRW0_9FIRM
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:EJZ70414.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
small GTP-binding protein
L3_114_000G1_scaffold_1675_22
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21638..23086)
DNA (1449bp) protein (483aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0Y3B2_9FIRM
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EJZ70415.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
iron-only hydrogenase maturation protein HydG
L3_114_000G1_scaffold_1675_23
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23068..24192)
DNA (1125bp) protein (375aa)
hydE; HydE (EC:2.8.1.6)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XIE6_9FIRM
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:EJZ70416.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
L3_114_000G1_scaffold_1675_24
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24185..24445)
DNA (261bp) protein (87aa)
Putative iron-only hydrogenase system regulator n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4K922_9FIRM
Putative iron-only hydrogenase system regulator {ECO:0000313|EMBL:EJP22016.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_000G1_scaffold_1675_25
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24691..25809)
DNA (1119bp) protein (373aa)
Peptidase propeptide and YPEB domain protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LUV3_9FIRM
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:EHO52764.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L3_114_000G1_scaffold_1675_26
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25809..26381)
DNA (573bp) protein (191aa)
RNA polymerase sigma factor n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XRW4_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
RNA polymerase sigma factor, sigma-70 family
L3_114_000G1_scaffold_1675_27
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26457..27746)
DNA (1290bp) protein (430aa)
MATE domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TGD5_9FIRM
MATE domain protein {ECO:0000313|EMBL:EJP22164.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_000G1_scaffold_1675_28
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27871..28407)
DNA (537bp) protein (179aa)
50S ribosomal protein L17 n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TG81_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
LSU ribosomal protein L17P
L3_114_000G1_scaffold_1675_29
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28477..28956)
DNA (480bp) protein (160aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Clostridiales RepID=J5GQ86_9FIRM
DNA-directed RNA polymerase subunit alpha
Displaying 29 items

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