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L3_114_000G1_scaffold_2468

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_2468_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..801
DNA (801bp) protein (267aa)
Polysaccharide deacetylase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KXA8_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:ERJ96927.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted xylanase/chitin deacetylase
L3_114_000G1_scaffold_2468_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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741..1838
DNA (1098bp) protein (366aa)
Stage II sporulation protein P n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KEH0_9FIRM
Stage II sporulation protein P {ECO:0000313|EMBL:ERJ96926.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
stage II sporulation protein P
L3_114_000G1_scaffold_2468_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1842..2141
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KXT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96925.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_000G1_scaffold_2468_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2407..3204
DNA (798bp) protein (266aa)
Methyltransferase domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5B1_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:ERJ96924.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Methyltransferase domain.
L3_114_000G1_scaffold_2468_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3240..4061
DNA (822bp) protein (274aa)
DNA repair photolyase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MMM6_9FIRM
DNA repair photolyase
DNA repair photolyase {ECO:0000313|EMBL:CBL35009.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_114_000G1_scaffold_2468_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4124..4381)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KXA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96922.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_000G1_scaffold_2468_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4374..5060)
DNA (687bp) protein (229aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KEG4_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERJ96921.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_000G1_scaffold_2468_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5057..6364)
DNA (1308bp) protein (436aa)
GDSL-like protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KXS8_9FIRM
GDSL-like protein {ECO:0000313|EMBL:ERJ96920.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
G-D-S-L family lipolytic protein
L3_114_000G1_scaffold_2468_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6379..7629)
DNA (1251bp) protein (417aa)
GDSL-like protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5A6_9FIRM
GDSL-like protein {ECO:0000313|EMBL:ERJ96919.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Lysophospholipase L1 and related esterases
L3_114_000G1_scaffold_2468_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7873..10428
DNA (2556bp) protein (852aa)
Beta-mannanase/endoglucanase A domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MC90_9FIRM
Beta-mannanase/endoglucanase A domain protein {ECO:0000313|EMBL:ERJ96918.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_000G1_scaffold_2468_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10491..12737)
DNA (2247bp) protein (749aa)
DNA topoisomerase (EC:5.99.1.3)
DNA gyrase/topoisomerase IV, A subunit n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KX96_9FIRM
DNA gyrase/topoisomerase IV, A subunit {ECO:0000313|EMBL:ERJ96917.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_000G1_scaffold_2468_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12752..14731)
DNA (1980bp) protein (660aa)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit (EC:5.99.1.3)
DNA gyrase, B subunit protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KEG0_9FIRM
DNA gyrase, B subunit protein {ECO:0000313|EMBL:ERJ96916.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_000G1_scaffold_2468_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15468..17273)
DNA (1806bp) protein (602aa)
Cellulase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KDU4_9FIRM
Cellulase {ECO:0000313|EMBL:ERJ96686.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
cellulase
L3_114_000G1_scaffold_2468_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17500..18189)
DNA (690bp) protein (230aa)
Transcriptional regulator, GntR family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MBL4_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERJ96688.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
GntR family transcriptional regulator
L3_114_000G1_scaffold_2468_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18198..18890)
DNA (693bp) protein (231aa)
TIGR00659 family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M4L9_9FIRM
TIGR00659 family protein {ECO:0000313|EMBL:ERJ96689.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
LrgB family protein
L3_114_000G1_scaffold_2468_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18883..19254)
DNA (372bp) protein (124aa)
LrgA family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KX65_9FIRM
LrgA family protein {ECO:0000313|EMBL:ERJ96690.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
holin-like protein
L3_114_000G1_scaffold_2468_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19399..20781)
DNA (1383bp) protein (461aa)
MATE efflux family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KDU9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:ERJ96691.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
MATE efflux family protein
Displaying 17 items

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