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L3_114_000G1_scaffold_2594

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_2594_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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210..860
DNA (651bp) protein (217aa)
HAD hydrolase, family IA, variant 3 (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JK60_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERJ86636.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
HAD-superfamily hydrolase
L3_114_000G1_scaffold_2594_2
unknown

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1063..1818
DNA (756bp) protein (252aa)

This feature has no annotations

L3_114_000G1_scaffold_2594_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2042..3943
DNA (1902bp) protein (634aa)
Chaperone protein HtpG n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHS4_9FIRM
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Molecular chaperone, HSP90 family
L3_114_000G1_scaffold_2594_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4089..4427)
DNA (339bp) protein (113aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KJH0_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERJ92200.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted transcriptional regulators
L3_114_000G1_scaffold_2594_5
unknown

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4740..5831
DNA (1092bp) protein (364aa)

This feature has no annotations

L3_114_000G1_scaffold_2594_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6164..7111
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K2Z7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86622.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_000G1_scaffold_2594_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7166..7429)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JK47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86621.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_000G1_scaffold_2594_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7738..8784
DNA (1047bp) protein (349aa)
ABC transporter, substrate-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LAY2_9FIRM
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ERJ86619.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_114_000G1_scaffold_2594_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8772..9479
DNA (708bp) protein (236aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHQ8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ86618.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_000G1_scaffold_2594_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9476..10318
DNA (843bp) protein (281aa)
ABC 3 transport family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K2Z4_9FIRM
ABC 3 transport family protein {ECO:0000313|EMBL:ERJ86617.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC transporter
L3_114_000G1_scaffold_2594_11
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10389..11534)
DNA (1146bp) protein (382aa)
Acyltransferase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4G3_9FIRM
Acyltransferase {ECO:0000313|EMBL:EDM52062.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_114_000G1_scaffold_2594_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11718..12482
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86623.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_000G1_scaffold_2594_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12529..13260
DNA (732bp) protein (244aa)
Metallo-beta-lactamase domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LAY5_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERJ86624.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Zn-dependent hydrolase
L3_114_000G1_scaffold_2594_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13359..14087
DNA (729bp) protein (243aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K302_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ERJ86627.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_000G1_scaffold_2594_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14362..15420)
DNA (1059bp) protein (353aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LE21_9FIRM
L3_114_000G1_scaffold_2594_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15615..16397)
DNA (783bp) protein (261aa)
Metal cation transporter, ZIP family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LDZ8_9FIRM
Metal cation transporter, ZIP family {ECO:0000313|EMBL:ERJ87694.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
putative metal cations transporter
L3_114_000G1_scaffold_2594_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16429..17322)
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K864_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ERJ94691.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
LysR family transcriptional regulator
L3_114_000G1_scaffold_2594_18
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17488..17997
DNA (510bp) protein (170aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P4M2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEG36489.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L3_114_000G1_scaffold_2594_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18002..18220
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X906_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47898.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dehydrogenase
L3_114_000G1_scaffold_2594_20
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18236..18835
DNA (600bp) protein (200aa)
Uncharacterized protein n=4 Tax=Bacteroides dorei RepID=I8VMM5_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB26557.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
short-chain dehydrogenase
L3_114_000G1_scaffold_2594_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18871..19722
DNA (852bp) protein (284aa)
Organophosphate reductase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KFN8_9FIRM
Organophosphate reductase {ECO:0000313|EMBL:ERJ91042.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
oxidoreductase
L3_114_000G1_scaffold_2594_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19738..20172
DNA (435bp) protein (145aa)
Cupin domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JXQ5_9FIRM
Cupin domain protein {ECO:0000313|EMBL:ERJ91041.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
Displaying 22 items

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