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L3_114_000G1_scaffold_2981

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_2981_1
unknown

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comp(118..291)
DNA (174bp) protein (58aa)

This feature has no annotations

L3_114_000G1_scaffold_2981_2
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(288..878)
DNA (591bp) protein (197aa)
ATPase P-type (Transporting) HAD superfamily subfamily IC n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7GXK9_9FIRM
ATPase P-type (Transporting) HAD superfamily subfamily IC {ECO:0000313|EMBL:CDE31840.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC
L3_114_000G1_scaffold_2981_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(903..1880)
DNA (978bp) protein (326aa)
Cadmium-exporting ATPase n=1 Tax=Clostridium sp. D5 RepID=F0YXH6_9CLOT
Cadmium-exporting ATPase {ECO:0000313|EMBL:EGB93664.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_114_000G1_scaffold_2981_4
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2033..2308)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5UWQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ82753.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
hypothetical protein
L3_114_000G1_scaffold_2981_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2722..2976
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KAV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89230.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_000G1_scaffold_2981_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2976..5093
DNA (2118bp) protein (706aa)
heavy metal translocating P-type ATPase (EC:3.6.3.-)
Heavy metal translocating P-type ATPase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JSI1_9FIRM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ERJ89231.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_000G1_scaffold_2981_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5274..6962
DNA (1689bp) protein (563aa)
FMN-binding domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KAD8_9FIRM
FMN-binding domain protein {ECO:0000313|EMBL:ERJ89232.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_000G1_scaffold_2981_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6969..7409
DNA (441bp) protein (147aa)
FMN-binding domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LQ18_9FIRM
FMN-binding domain protein {ECO:0000313|EMBL:ERJ89233.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_000G1_scaffold_2981_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7402..8256
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LIB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89234.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_000G1_scaffold_2981_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8477..11122)
DNA (2646bp) protein (882aa)
Dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KAE3_9FIRM
Dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ89237.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Bacterial surface proteins containing Ig-like domains
L3_114_000G1_scaffold_2981_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11377..11922)
DNA (546bp) protein (182aa)
Heptaprenyl diphosphate synthase component I n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LIA2_9FIRM
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:ERJ89219.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
heptaprenyl diphosphate synthase component I
L3_114_000G1_scaffold_2981_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11906..12286)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KAU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89220.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_000G1_scaffold_2981_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12283..13362)
DNA (1080bp) protein (360aa)
ApbE family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JSH3_9FIRM
ApbE family protein {ECO:0000313|EMBL:ERJ89221.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
apbE; thiamine biosynthesis lipoprotein
L3_114_000G1_scaffold_2981_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13643..14551
DNA (909bp) protein (303aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
fruK; fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LQ09_9FIRM
L3_114_000G1_scaffold_2981_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14677..15813
DNA (1137bp) protein (379aa)
Exonuclease SbcCD, D subunit (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LI63_9FIRM
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:ERJ89174.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
sbcD; Exonuclease SbcD
L3_114_000G1_scaffold_2981_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15810..18074
DNA (2265bp) protein (755aa)
Exonuclease SbcCD, C subunit n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KAQ2_9FIRM
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:ERJ89175.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
chromosome segregation protein SMC
Displaying 16 items

View Taxonomy