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L3_114_000G1_scaffold_29

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Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_29_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..403
DNA (402bp) protein (134aa)
Glutamine synthetase, catalytic domain protein n=15 Tax=Pseudomonas aeruginosa RepID=T2E1M9_PSEAI
glutamine synthetase family protein
Glutamine synthetase {ECO:0000313|EMBL:ETU82980.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
L3_114_000G1_scaffold_29_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

560..1930
DNA (1371bp) protein (457aa)
Amino acid permease family protein n=64 Tax=Pseudomonas aeruginosa RepID=T2E6D0_PSEAI
Putrescine importer PuuP
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI76027.1}; Putative amino acid permease {ECO:0000313|EMBL:CKH58449.1}; Putrescine importer {ECO:0000313|EMBL:BAR68180.1}; Putrescine importer PuuP {ECO:0000313|EMBL:AKE70192.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_29_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2418..3647
DNA (1230bp) protein (410aa)
Serine/threonine transporter SstT n=55 Tax=Pseudomonas aeruginosa RepID=SSTT_PSEAE
serine/threonine transporter
Serine/threonine transporter SstT {ECO:0000255|HAMAP-Rule:MF_01582}; Na(+)/serine-threonine symporter {ECO:0000255|HAMAP-Rule:MF_01582}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
L3_114_000G1_scaffold_29_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3768..4670
DNA (903bp) protein (301aa)
Pseudouridine synthase {ECO:0000313|EMBL:AKE70190.1}; Pseudouridylate synthase {ECO:0000313|EMBL:CKH58395.1}; EC=5.4.99.28 {ECO:0000313|EMBL:CKH58395.1};; Putative ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:BAR68178.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Pseudouridine synthase n=49 Tax=Pseudomonas RepID=G2L5Y6_PSEAI
putative pseudouridylate synthase
L3_114_000G1_scaffold_29_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4829..6703)
DNA (1875bp) protein (625aa)
Uncharacterized protein n=45 Tax=Pseudomonas RepID=I6RZJ5_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHW71479.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_29_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6878..7138)
DNA (261bp) protein (87aa)
Putative membrane protein insertion efficiency factor n=78 Tax=Pseudomonas RepID=YIDD_PSEA8
Protein YidD
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_29_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7197..8552)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=8 Tax=Pseudomonas aeruginosa RepID=G4LFF3_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHW71477.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_29_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8640..9572)
DNA (933bp) protein (311aa)
Transcriptional regulator n=3 Tax=Pseudomonas aeruginosa RepID=K1DSE5_PSEAI
Transcriptional regulator, AraC family
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI76033.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_29_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9836..10033
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=S0I5D7_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AHW71475.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
Hypothetical protein
L3_114_000G1_scaffold_29_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10160..10456
DNA (297bp) protein (99aa)
Uncharacterized protein n=71 Tax=Pseudomonas aeruginosa RepID=R9ZFM8_PSEAI
Antibiotic biosynthesis monooxygenase domain protein
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI76034.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_29_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10514..12508)
DNA (1995bp) protein (665aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=M1YXF1_PSEAI
putative peptide methionine sulfoxide reductase
Uncharacterized protein {ECO:0000313|EMBL:BAR68169.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_29_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12836..13342
DNA (507bp) protein (169aa)
RNA polymerase sigma factor n=89 Tax=Pseudomonas RepID=G2L5X9_PSEAI
RNA polymerase sigma factor
Uncharacterized protein {ECO:0000313|EMBL:CDH77570.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
L3_114_000G1_scaffold_29_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13339..14292
DNA (954bp) protein (318aa)
Iron dicitrate transporter FecR n=57 Tax=Pseudomonas RepID=R9ZC89_PSEAI
putative Fe2+-dicitrate sensor, membrane component
Iron dicitrate transport regulator FecR {ECO:0000313|EMBL:AKE70182.1}; Iron siderophore sensor protein {ECO:0000313|EMBL:BAR68167.1}; Putative Fe2+-dicitrate sensor%2C membrane component {ECO:0000313|EMBL:CKH58112.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_29_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14330..14800)
DNA (471bp) protein (157aa)
Cyanate hydratase {ECO:0000256|HAMAP-Rule:MF_00535}; Short=Cyanase {ECO:0000256|HAMAP-Rule:MF_00535};; EC=4.2.1.104 {ECO:0000256|HAMAP-Rule:MF_00535};; Cyanate hydrolase {ECO:0000256|HAMAP-Rule:MF_00535}; Cyanate lyase {ECO:0000256|HAMAP-Rule:MF_00535}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
Cyanate hydratase n=96 Tax=Pseudomonas RepID=CYNS_PSEA8
cynS; cyanate hydratase
L3_114_000G1_scaffold_29_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14840..15502)
DNA (663bp) protein (221aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
Carbonic anhydrase n=58 Tax=Pseudomonas aeruginosa RepID=CYNT_PSEAE
carbonic anhydrase
L3_114_000G1_scaffold_29_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15617..16504
DNA (888bp) protein (296aa)
Transcriptional regulator CynR n=83 Tax=Pseudomonas aeruginosa RepID=B7VA49_PSEA8
transcriptional regulator
Transcriptional regulator CynR {ECO:0000313|EMBL:AAG05442.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
L3_114_000G1_scaffold_29_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16511..17926)
DNA (1416bp) protein (472aa)
Major Facilitator Superfamily protein n=13 Tax=Pseudomonas aeruginosa RepID=T2DWK9_PSEAI
major facilitator transporter
Probable major facilitator superfamily (MFS) transporter {ECO:0000313|EMBL:AAG05443.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
L3_114_000G1_scaffold_29_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18010..18939
DNA (930bp) protein (310aa)
LysR family transcriptional regulator n=81 Tax=Pseudomonas RepID=G4LFG4_PSEAI
LysR family transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CDH77564.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
L3_114_000G1_scaffold_29_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19327..22284
DNA (2958bp) protein (986aa)
Uncharacterized protein n=9 Tax=Pseudomonas aeruginosa RepID=I6SY16_PSEAI
hypothetical protein
TonB-dependent receptor {ECO:0000313|EMBL:ETU82962.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
L3_114_000G1_scaffold_29_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22288..24096
DNA (1809bp) protein (603aa)
Bacterial extracellular solute-binding s, 5 Middle family protein n=17 Tax=Pseudomonas RepID=T2E435_PSEAI
bacterial extracellular solute-binding s, 5 Middle family protein
ABC transporter {ECO:0000313|EMBL:CEI20448.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_29_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24098..25171
DNA (1074bp) protein (358aa)
Permease of ABC transporter n=27 Tax=Pseudomonas RepID=K1CRR7_PSEAI
ABC transporter permease
Peptide ABC transporter permease {ECO:0000313|EMBL:AKE70176.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI76046.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_29_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25173..26189
DNA (1017bp) protein (339aa)
ABC transporter permease n=28 Tax=Pseudomonas aeruginosa RepID=S0I4J9_PSEAI
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI76047.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
ABC transporter, permease protein
L3_114_000G1_scaffold_29_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26191..27801
DNA (1611bp) protein (537aa)
Microcin C ABC transporter ATP-binding protein YejF n=40 Tax=Pseudomonas aeruginosa RepID=R9ZEE9_PSEAI
ATP-binding component of ABC transporter {ECO:0000313|EMBL:AHW71462.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
putative ATP-binding component of ABC transporter
L3_114_000G1_scaffold_29_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27947..29128
DNA (1182bp) protein (394aa)
Cysteine desulfurase (EC:2.8.1.7)
Class V aminotransferase n=61 Tax=Pseudomonas aeruginosa RepID=R9ZC98_PSEAI
Pyridoxal-phosphate dependent protein {ECO:0000313|EMBL:ETU82957.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
L3_114_000G1_scaffold_29_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29331..30554
DNA (1224bp) protein (408aa)
Uncharacterized protein n=106 Tax=Pseudomonas RepID=B7VA40_PSEA8
hypothetical protein
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI76050.1}; Uncharacterized conserved protein {ECO:0000313|EMBL:CKH57632.1}; Uncharacterized protein {ECO:0000313|EMBL:CEI20458.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_29_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30574..31629)
DNA (1056bp) protein (352aa)
Copper resistance protein B n=36 Tax=Pseudomonas aeruginosa RepID=E3A3Q9_PSEAI
pcoB; copper resistance protein B
Copper resistance protein B {ECO:0000313|EMBL:CDH77556.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
L3_114_000G1_scaffold_29_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31626..33470)
DNA (1845bp) protein (615aa)
Copper resistance protein A n=30 Tax=Pseudomonas aeruginosa RepID=B7VA39_PSEA8
copper oxidase
Copper resistance protein A {ECO:0000313|EMBL:AHW71458.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_29_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33619..34257)
DNA (639bp) protein (213aa)
Uncharacterized protein n=101 Tax=Pseudomonas RepID=B7VA38_PSEA8
hypothetical protein
DUF218 domain {ECO:0000313|EMBL:CKH57528.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI76053.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ40259.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_29_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34254..34922)
DNA (669bp) protein (223aa)
Hydrolase n=79 Tax=Pseudomonas RepID=M9S8T9_PSEAI
hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAR68151.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_29_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34924..36087)
DNA (1164bp) protein (388aa)
Major facilitator superfamily transporter n=6 Tax=Pseudomonas aeruginosa RepID=M3AXR4_PSEAI
Major facilitator superfamily (MFS) transporter {ECO:0000313|EMBL:AHW71455.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
MFS transporter
Displaying items 1-30 of 184 in total

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