ggKbase home page

L3_114_000G1_scaffold_738

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_738_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..430)
DNA (429bp) protein (143aa)
Major exported protein n=23 Tax=Pseudomonas RepID=T2DXX1_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB56874.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;"
L3_114_000G1_scaffold_738_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1043..2320)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=53 Tax=Pseudomonas RepID=Q9I3K0_PSEAE
cytochrome c family protein
Membrane protein {ECO:0000313|EMBL:AHB56873.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;"
L3_114_000G1_scaffold_738_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2369..2878)
DNA (510bp) protein (170aa)
Ureidoglycolate hydrolase (EC:3.5.3.19)
Ureidoglycolate lyase {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913};; Ureidoglycolatase {ECO:0000256|HAMAP-Rule:MF_00616}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
Ureidoglycolate lyase n=118 Tax=Pseudomonas RepID=ALLA_PSEA8
L3_114_000G1_scaffold_738_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2933..3931)
DNA (999bp) protein (333aa)
Probable allantoicase {ECO:0000256|HAMAP-Rule:MF_00813}; EC=3.5.3.4 {ECO:0000256|HAMAP-Rule:MF_00813};; Allantoate amidinohydrolase {ECO:0000256|HAMAP-Rule:MF_00813}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Allantoicase n=19 Tax=Pseudomonas aeruginosa RepID=V8GAZ3_PSEAI
alc; allantoicase
L3_114_000G1_scaffold_738_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3949..4464)
DNA (516bp) protein (172aa)
OHCU decarboxylase n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8GC51_PSEAI
OHCU decarboxylase
Uncharacterized protein {ECO:0000313|EMBL:AHW72101.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_738_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4461..5387)
DNA (927bp) protein (309aa)
Uricase (urate oxidase) (EC:1.7.3.3)
Uncharacterized protein n=114 Tax=Pseudomonas RepID=G4LTB9_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ETU92963.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
L3_114_000G1_scaffold_738_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5760..6140
DNA (381bp) protein (127aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
5-hydroxyisourate hydrolase n=98 Tax=Pseudomonas RepID=HIUH_PSEAE
putative transthyretin family protein
L3_114_000G1_scaffold_738_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6381..7730)
DNA (1350bp) protein (450aa)
Adenine permease n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8GA95_PSEAI
Xanthine/uracil/thiamin/ascorbate permease family protein {ECO:0000313|EMBL:BAR68728.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
permease family protein
L3_114_000G1_scaffold_738_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8105..8884
DNA (780bp) protein (260aa)
Transcriptional regulator n=125 Tax=Pseudomonas RepID=M9S4T9_PSEAI
Transcriptional regulator, GntR family
Transcriptional regulator {ECO:0000313|EMBL:EZO93357.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L3_114_000G1_scaffold_738_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8938..10242)
DNA (1305bp) protein (435aa)
Guanine deaminase n=12 Tax=Pseudomonas aeruginosa RepID=I6SVB6_PSEAI
guanine deaminase
Guanine deaminase {ECO:0000313|EMBL:EZO93356.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L3_114_000G1_scaffold_738_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10312..11151)
DNA (840bp) protein (280aa)
Xanthine dehydrogenase accessory factor X n=12 Tax=Pseudomonas aeruginosa RepID=M9S8N6_PSEAI
xanthine dehydrogenase accessory factor X
Putative xanthine dehydrogenase accessory factor X {ECO:0000313|EMBL:BAQ40853.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_738_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11178..13577)
DNA (2400bp) protein (800aa)
Xanthine dehydrogenase, molybdopterin binding subunit n=2 Tax=Pseudomonas aeruginosa RepID=U9GCB1_PSEAI
Xanthine dehydrogenase {ECO:0000313|EMBL:EQL41277.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA03.;"
xdhB; xanthine dehydrogenase
L3_114_000G1_scaffold_738_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13570..15024)
DNA (1455bp) protein (485aa)
Molybdopterin dehydrogenase n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8G9Y9_PSEAI
molybdopterin dehydrogenase
FAD-binding molybdopterin dehydrogenase {ECO:0000313|EMBL:AKE70815.1}; Xanthine dehydrogenase {ECO:0000313|EMBL:CEI19348.1}; Xanthine dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:BAR68722.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_738_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15245..16378)
DNA (1134bp) protein (378aa)
Alkane-1 monooxygenase (EC:1.14.15.3)
Alkane 1-monooxygenase 2 n=110 Tax=Pseudomonas RepID=ALKB2_PSEAE
Alkane 1-monooxygenase 2 {ECO:0000313|EMBL:ETU70824.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
L3_114_000G1_scaffold_738_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16559..17218
DNA (660bp) protein (220aa)
Bacterial regulatory s, gntR family protein n=79 Tax=Pseudomonas RepID=T2E4G8_PSEAI
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AKE70813.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI77253.1}; Transcriptional regulator {ECO:0000313|EMBL:CEI19351.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_738_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17244..20732
DNA (3489bp) protein (1163aa)
Chromosome segregation protein SMC n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8GC62_PSEAI
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
Chromosome partition protein smc
L3_114_000G1_scaffold_738_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20897..21766
DNA (870bp) protein (290aa)
Cell division protein ZipA homolog n=83 Tax=Pseudomonas RepID=ZIPA_PSEA8
Cell division protein ZipA
Cell division protein ZipA homolog {ECO:0000255|HAMAP-Rule:MF_00509}; TaxID=557722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain LESB58).;"
L3_114_000G1_scaffold_738_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21857..24241
DNA (2385bp) protein (795aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
DNA ligase n=41 Tax=Pseudomonas aeruginosa RepID=DNLJ_PSEA8
NAD-dependent DNA ligase LigA
L3_114_000G1_scaffold_738_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24287..24664
DNA (378bp) protein (126aa)
Uncharacterized protein n=123 Tax=Pseudomonas RepID=B7UVJ2_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERV77720.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
L3_114_000G1_scaffold_738_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24918..25784)
DNA (867bp) protein (289aa)
Uncharacterized protein n=68 Tax=Pseudomonas RepID=B7UVJ1_PSEA8
hypothetical protein
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI77248.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_738_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25872..27899
DNA (2028bp) protein (676aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:CKH77867.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CKH77867.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
DNA polymerase III, subunit gamma and tau n=2 Tax=Pseudomonas aeruginosa RepID=U8TGT6_PSEAI
dnaX; DNA polymerase III subunits gamma and tau
L3_114_000G1_scaffold_738_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27945..28271
DNA (327bp) protein (109aa)
Nucleoid-associated protein PA1533 n=133 Tax=Pseudomonas RepID=Y1533_PSEAE
hypothetical protein
Nucleoid-associated protein PA14_44620 {ECO:0000255|HAMAP-Rule:MF_00274}; TaxID=208963 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain UCBPP-PA14).;"
L3_114_000G1_scaffold_738_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28350..28946
DNA (597bp) protein (199aa)
Recombination protein RecR n=106 Tax=Pseudomonas RepID=RECR_PSEA8
Recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
L3_114_000G1_scaffold_738_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29069..30217
DNA (1149bp) protein (383aa)
Acyl-CoA dehydrogenase, short-chain specific (EC:1.3.8.1)
Acyl-CoA dehydrogenase n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8GJH2_PSEAI
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AHW71998.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_738_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30230..30769)
DNA (540bp) protein (180aa)
Uncharacterized protein n=9 Tax=Pseudomonas aeruginosa RepID=U8E9B5_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHW71997.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_738_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30843..31730)
DNA (888bp) protein (296aa)
Short chain dehydrogenase family protein n=75 Tax=Pseudomonas aeruginosa RepID=T2E4L3_PSEAI
short chain dehydrogenase family protein
Probable short-chain dehydrogenase {ECO:0000313|EMBL:AAG04926.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
L3_114_000G1_scaffold_738_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31727..33271)
DNA (1545bp) protein (515aa)
Cyclohexanone monooxygenase (EC:1.14.13.22)
Flavin-containing monooxygenase n=100 Tax=Pseudomonas RepID=M9SAD8_PSEAI
4-hydroxyacetophenone monooxygenase {ECO:0000313|EMBL:ETD48311.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
L3_114_000G1_scaffold_738_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33424..34272
DNA (849bp) protein (283aa)
Uncharacterized protein n=43 Tax=Pseudomonas RepID=B7UVI3_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHW71994.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_738_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34126..34455)
DNA (330bp) protein (110aa)
Multidrug efflux system protein MdtI n=65 Tax=Pseudomonas RepID=M9S4S5_PSEAI
small Multidrug Resistance family protein
Multidrug efflux system protein MdtI {ECO:0000313|EMBL:AHW71993.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_738_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34449..34817)
DNA (369bp) protein (123aa)
Drug efflux transporter n=2 Tax=Pseudomonas aeruginosa RepID=U8PS16_PSEAI
mdtJ; spermidine export protein mdtJ
Putative drug efflux transporter {ECO:0000313|EMBL:CKH77502.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Displaying items 1-30 of 48 in total

View Taxonomy