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L3_114_000G1_scaffold_1033

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_1033_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..151
DNA (150bp) protein (50aa)
Outer membrane protein n=1 Tax=Pseudomonas aeruginosa BWHPSA025 RepID=U8PK91_PSEAI
putative outer membrane protein
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
L3_114_000G1_scaffold_1033_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247..1137
DNA (891bp) protein (297aa)
Transcriptional regulator n=101 Tax=Pseudomonas RepID=R9ZK68_PSEAI
Transcriptional regulator, LysR family
Probable transcriptional regulator {ECO:0000313|EMBL:AAG07532.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
L3_114_000G1_scaffold_1033_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1124..1735)
DNA (612bp) protein (204aa)
Amino acid transporter LysE n=2 Tax=Pseudomonas aeruginosa RepID=V4X979_PSEAI
Transporter, LysE family
Amino acid transporter LysE {ECO:0000313|EMBL:ETD55448.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
L3_114_000G1_scaffold_1033_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1940..3817)
DNA (1878bp) protein (626aa)
Transcriptional regulator AcoR n=1 Tax=Pseudomonas aeruginosa PAK RepID=S0J6T8_PSEAI
acoR; transcriptional regulator
Fis family transcriptional regulator {ECO:0000313|EMBL:ETD55449.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
L3_114_000G1_scaffold_1033_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4107..4907
DNA (801bp) protein (267aa)
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein n=89 Tax=Pseudomonas RepID=T2E2S2_PSEAI
putative short-chain dehydrogenase
Probable short-chain dehydrogenase {ECO:0000313|EMBL:AAG07535.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
L3_114_000G1_scaffold_1033_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4904..5944
DNA (1041bp) protein (347aa)
Uncharacterized protein n=86 Tax=Pseudomonas RepID=Q9HWN2_PSEAE
ATP-NAD kinase
Uncharacterized protein {ECO:0000313|EMBL:CEI01563.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_1033_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5967..6941
DNA (975bp) protein (325aa)
Acetoin dehydrogenase E1 component alpha-subunit (EC:1.2.4.-)
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha n=85 Tax=Pseudomonas RepID=R9ZHL6_PSEAI
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha {ECO:0000313|EMBL:AHB54060.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;"
L3_114_000G1_scaffold_1033_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6974..7993
DNA (1020bp) protein (340aa)
Acetoin catabolism protein AcoB n=108 Tax=Pseudomonas RepID=B7V6F5_PSEA8
pyruvate dehydrogenase subunit beta
Acetoin catabolism protein AcoB {ECO:0000313|EMBL:AHW69277.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_1033_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7990..9102
DNA (1113bp) protein (371aa)
Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex (EC:2.3.1.-)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=68 Tax=Pseudomonas RepID=G2L9P3_PSEAI
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:AHW69276.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_1033_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9116..10207
DNA (1092bp) protein (364aa)
2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC:1.1.1.4)
2%2C3-butanediol dehydrogenase {ECO:0000313|EMBL:CKG85623.1}; EC=1.1.1.14 {ECO:0000313|EMBL:CKG85623.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
2,3-butanediol dehydrogenase n=54 Tax=Pseudomonas RepID=B7V6F3_PSEA8
L3_114_000G1_scaffold_1033_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10291..10959)
DNA (669bp) protein (223aa)
Arylsulfatase (EC:3.1.6.1)
SH3 type 3 domain-containing protein n=105 Tax=Pseudomonas RepID=M9RUI7_PSEAI
SH3 domain-containing protein {ECO:0000313|EMBL:EZP06711.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L3_114_000G1_scaffold_1033_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11396..12703)
DNA (1308bp) protein (436aa)
Nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase n=23 Tax=Pseudomonas RepID=N2CUJ6_9PSED
monooxygenase
Monooxygenase {ECO:0000313|EMBL:AKE67513.1}; Putative oxidoreductase {ECO:0000313|EMBL:CEI01535.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_1033_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12771..14855)
DNA (2085bp) protein (695aa)
Iron ABC transporter substrate-binding protein n=39 Tax=Pseudomonas aeruginosa RepID=R9ZK78_PSEAI
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKE67512.1}; Outer membrane receptor protein {ECO:0000313|EMBL:BAR65713.1}; Putative TonB-dependent receptor protein {ECO:0000313|EMBL:CKG85513.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
putative TonB-dependent receptor protein
L3_114_000G1_scaffold_1033_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15080..15898
DNA (819bp) protein (273aa)
Transcriptional regulator, IclR family n=12 Tax=Pseudomonas aeruginosa RepID=M1YKN3_PSEAI
IclR family transcriptional regulator
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI75082.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_1033_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15905..16702)
DNA (798bp) protein (266aa)
Ferric enterobactin transport protein FepC n=109 Tax=Pseudomonas RepID=E2ZZS2_PSEAI
ABC transporter
Ferric enterobactin transport ATP-binding protein FepC {ECO:0000313|EMBL:BAR65711.1}; Ferric enterobactin transport protein {ECO:0000313|EMBL:BAQ37555.1}; Iron-dicitrate transporter ATP-binding subunit {ECO:0000313|EMBL:AKE67510.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI75081.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_1033_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16829..17734
DNA (906bp) protein (302aa)
Ferrienterobactin-binding periplasmic protein FepB n=92 Tax=Pseudomonas RepID=E2ZZS3_PSEAI
Ferric enterobactin-binding periplasmic protein FepB
Antibiotic ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETD55461.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
L3_114_000G1_scaffold_1033_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17765..18787
DNA (1023bp) protein (341aa)
Ferric enterobactin transport protein FepD n=72 Tax=Pseudomonas RepID=M9RX11_PSEAI
Ferric enterobactin transport system permease protein FepD
Ferric enterobactin transporter FepD {ECO:0000313|EMBL:ERV66733.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
L3_114_000G1_scaffold_1033_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18784..19815
DNA (1032bp) protein (344aa)
Ferric enterobactin transport protein FepG n=45 Tax=Pseudomonas RepID=G2L9N4_PSEAI
fepG; ferric enterobactin transport protein FepG
Ferric enterobactin transporter FepG {ECO:0000313|EMBL:AHW69267.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_1033_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19826..20542)
DNA (717bp) protein (239aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:BAR65707.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI75077.1}; Short chain dehydrogenase {ECO:0000313|EMBL:CKG85314.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CKG85314.1};; Short-chain dehydrogenase {ECO:0000313|EMBL:AKE67506.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Short chain dehydrogenase n=88 Tax=Pseudomonas RepID=G2L9N3_PSEAI
short-chain dehydrogenase
L3_114_000G1_scaffold_1033_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20847..22556
DNA (1710bp) protein (570aa)
Amidase {ECO:0000313|EMBL:CEI01509.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CEI01509.1};; EC=3.5.1.86 {ECO:0000313|EMBL:CKG85285.1};; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI75076.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
amidase (EC:3.5.1.4)
Amidase n=82 Tax=Pseudomonas RepID=G2L9N2_PSEAI
L3_114_000G1_scaffold_1033_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22618..22944
DNA (327bp) protein (109aa)
Uncharacterized protein n=99 Tax=Pseudomonas aeruginosa RepID=B7V6E2_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD55465.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
L3_114_000G1_scaffold_1033_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22960..24450)
DNA (1491bp) protein (497aa)
Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC:2.6.1.1)
DNA-binding protein n=37 Tax=Pseudomonas aeruginosa RepID=R9ZIM6_PSEAI
Probable transcriptional regulator {ECO:0000313|EMBL:AAG07552.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
L3_114_000G1_scaffold_1033_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24582..25040
DNA (459bp) protein (153aa)
GNAT family acetyltransferase n=48 Tax=Pseudomonas aeruginosa RepID=R9ZJS0_PSEAI
Histone acetyltransferase HPA2-related acetyltransferase
GNAT family acetyltransferase {ECO:0000313|EMBL:AKE67502.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI75073.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_1033_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25107..25925)
DNA (819bp) protein (273aa)
dkgB; 2,5-diketo-D-gluconic acid reductase (EC:1.1.1.274)
2%2C5-diketo-D-gluconate reductase B {ECO:0000313|EMBL:CKG85178.1}; EC=1.1.1.274 {ECO:0000313|EMBL:CKG85178.1};; 2,5-diketo-D-gluconic acid reductase {ECO:0000313|EMBL:AKE67501.1}; EC=1.1.1.274 {ECO:0000313|EMBL:AKE67501.1};; 2,5-diketo-D-gluconic acid reductase B {ECO:0000313|EMBL:CEI01487.1}; EC=1.1.1.274 {ECO:0000313|EMBL:CEI01487.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
2,5-diketo-D-gluconic acid reductase n=12 Tax=Pseudomonas aeruginosa RepID=R9ZHN0_PSEAI
L3_114_000G1_scaffold_1033_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26268..28676
DNA (2409bp) protein (803aa)
Type I ferripyoverdine receptor, FpvB n=31 Tax=Pseudomonas aeruginosa RepID=E2ZZT1_PSEAI
fpvB; type I ferripyoverdine receptor
Outer membrane ferripyoverdine receptor FpvB {ECO:0000313|EMBL:BAR65701.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_1033_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28741..29169)
DNA (429bp) protein (143aa)
Uncharacterized protein n=76 Tax=Pseudomonas RepID=Q9HWL2_PSEAE
Rrf2 family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ERV66718.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
L3_114_000G1_scaffold_1033_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29295..30182
DNA (888bp) protein (296aa)
Thioredoxin reductase (EC:1.8.1.9)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=K1CNL6_PSEAI
Thioredoxin reductase {ECO:0000313|EMBL:AHB54041.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;"
L3_114_000G1_scaffold_1033_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30318..30881
DNA (564bp) protein (188aa)
Glutamine amidotransferase {ECO:0000313|EMBL:AKE67497.1}; Putative protease {ECO:0000313|EMBL:CKG85044.1}; EC=3.2.-.- {ECO:0000313|EMBL:CKG85044.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Glutamine amidotransferase n=83 Tax=Pseudomonas RepID=R9ZJS3_PSEAI
glutamine amidotransferase
L3_114_000G1_scaffold_1033_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30904..31704
DNA (801bp) protein (267aa)
Exodeoxyribonuclease III (EC:3.1.11.2)
Nuclease n=64 Tax=Pseudomonas aeruginosa RepID=M9RVX0_PSEAI
Probable nuclease {ECO:0000313|EMBL:AAG07559.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
L3_114_000G1_scaffold_1033_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31736..32134)
DNA (399bp) protein (133aa)
Translation initiation inhibitor n=2 Tax=Pseudomonas aeruginosa RepID=U8G8S4_PSEAI
putative translation initiation inhibitor
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI75067.1}; Putative YjgF family translation initiation inhibitor {ECO:0000313|EMBL:BAR65696.1}; Putative translation initiation inhibitor {ECO:0000313|EMBL:BAQ37540.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Displaying items 1-30 of 69 in total

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