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L3_114_000G1_scaffold_1744

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_1744_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

275..607
DNA (333bp) protein (111aa)
Uncharacterized protein n=9 Tax=Pseudomonas aeruginosa RepID=S0IZV2_PSEAI
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74587.1}; Uncharacterised protein {ECO:0000313|EMBL:CKH39840.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
L3_114_000G1_scaffold_1744_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

813..1181
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8JSX9_PSEAI
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74586.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
L3_114_000G1_scaffold_1744_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1689..2213)
DNA (525bp) protein (175aa)
Uncharacterized protein n=75 Tax=Pseudomonas RepID=B7V891_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHW71003.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_1744_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2260..3408)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=53 Tax=Pseudomonas RepID=B7V890_PSEA8
peptidase
Peptidase {ECO:0000313|EMBL:AKE69674.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74584.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_1744_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3526..5988)
DNA (2463bp) protein (821aa)
Ferrioxamine receptor FoxA n=48 Tax=Pseudomonas RepID=G2KZ89_PSEAI
foxA; Ferrioxamine receptor FoxA
Ferrioxamine B receptor {ECO:0000313|EMBL:AKE69673.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74583.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_1744_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6132..7130)
DNA (999bp) protein (333aa)
Transmembrane sensor n=2 Tax=Pseudomonas aeruginosa RepID=U8CZV6_PSEAI
peptide ABC transporter substrate-binding protein
Transmembrane sensor {ECO:0000313|EMBL:ETU95363.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
L3_114_000G1_scaffold_1744_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7127..7645)
DNA (519bp) protein (173aa)
ECF sigma factor FoxI n=114 Tax=Pseudomonas RepID=B7V887_PSEA8
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein
ECF subfamily RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EZP06112.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L3_114_000G1_scaffold_1744_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7734..8648)
DNA (915bp) protein (305aa)
Transcriptional regulator n=115 Tax=Pseudomonas RepID=G4LJE9_PSEAI
Putative transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AKE69670.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74581.1}; Putative transcriptional regulator {ECO:0000313|EMBL:BAR67722.1}; Transcriptional regulator {ECO:0000313|EMBL:BAQ39698.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_1744_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8773..9834
DNA (1062bp) protein (354aa)
Gentisate 1,2-dioxygenase n=14 Tax=Pseudomonas RepID=R9ZD73_PSEAI
gentisate 1,2-dioxygenase
Gentisate 1,2-dioxygenase {ECO:0000313|EMBL:ETU95360.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
L3_114_000G1_scaffold_1744_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9847..10545
DNA (699bp) protein (233aa)
Uncharacterized protein n=55 Tax=Pseudomonas RepID=G4LJF1_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDH77141.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
L3_114_000G1_scaffold_1744_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10623..11969
DNA (1347bp) protein (449aa)
Major facilitator superfamily (MFS) transporter n=20 Tax=Pseudomonas aeruginosa RepID=K1BY08_PSEAI
MFS family transporter
4-hydroxybenzoate transporter {ECO:0000313|EMBL:AKE69667.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74578.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_1744_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11982..12626
DNA (645bp) protein (215aa)
maiA; maleylacetoacetate isomerase (EC:5.2.1.2)
Maleylacetoacetate isomerase n=61 Tax=Pseudomonas RepID=T2EJN9_PSEAI
Glutathione S-transferase {ECO:0000313|EMBL:CKH39457.1}; Maleylacetoacetate isomerase {ECO:0000313|EMBL:AKE69666.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74577.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_1744_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12668..13579
DNA (912bp) protein (304aa)
Protein involved in meta-pathway of phenol degradation n=46 Tax=Pseudomonas aeruginosa RepID=U6A734_PSEAI
Protein involved in meta-pathway of phenol degradation
Uncharacterized protein {ECO:0000313|EMBL:AHW70993.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_1744_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13561..14895)
DNA (1335bp) protein (445aa)
Cytochrome P450 n=49 Tax=Pseudomonas aeruginosa RepID=R9ZD79_PSEAI
putative cytochrome P450 hydroxylase
Cytochrome P450 {ECO:0000313|EMBL:AHW70992.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_1744_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14968..15738)
DNA (771bp) protein (257aa)
Thiol:disulfide interchange protein DsbG n=116 Tax=Pseudomonas RepID=DSBG_PSEAE
dsbG; disulfide isomerase/thiol-disulfide oxidase
Dihydroneopterin aldolase {ECO:0000313|EMBL:ETD46161.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
L3_114_000G1_scaffold_1744_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15735..16571)
DNA (837bp) protein (279aa)
Thiol:disulfide interchange protein n=4 Tax=Pseudomonas aeruginosa RepID=R8ZCX9_PSEAI
Peroxiredoxin {ECO:0000313|EMBL:AKE69662.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
thiol:disulfide interchange protein
L3_114_000G1_scaffold_1744_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16571..18334)
DNA (1764bp) protein (588aa)
Thiol:disulfide interchange protein DsbD {ECO:0000256|HAMAP-Rule:MF_00399}; EC=1.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00399};; Protein-disulfide reductase {ECO:0000256|HAMAP-Rule:MF_00399}; Flags: Precursor;; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
Thiol:disulfide interchange protein DsbD 2 n=59 Tax=Pseudomonas RepID=DSBD2_PSEAE
putative thiol:disulfide interchange protein
L3_114_000G1_scaffold_1744_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18497..19177
DNA (681bp) protein (227aa)
Two-component response regulator n=106 Tax=Pseudomonas RepID=M9S5S4_PSEAI
Two-component system response regulator QseB
Two-component system response regulator {ECO:0000313|EMBL:ERV79360.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
L3_114_000G1_scaffold_1744_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19174..20496
DNA (1323bp) protein (441aa)
Histidine kinase {ECO:0000313|EMBL:AKE69659.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI74570.1}; Two-component sensor {ECO:0000313|EMBL:CEI21384.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CKH39246.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
HAMP domain protein n=75 Tax=Pseudomonas aeruginosa RepID=U5R065_PSEAE
sensor histidine kinase
L3_114_000G1_scaffold_1744_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20672..21547)
DNA (876bp) protein (292aa)
Uncharacterized protein n=82 Tax=Pseudomonas RepID=B7V874_PSEA8
Cytochrome c family protein
Uncharacterized protein {ECO:0000313|EMBL:ETU95349.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
L3_114_000G1_scaffold_1744_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21544..22197)
DNA (654bp) protein (218aa)
Uncharacterized protein n=10 Tax=Pseudomonas RepID=N2D180_9PSED
cytochrome C
Cytochrome c {ECO:0000313|EMBL:ETU95348.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
L3_114_000G1_scaffold_1744_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22312..23313)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=96 Tax=Pseudomonas RepID=G4LJG4_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP06097.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L3_114_000G1_scaffold_1744_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23464..24078)
DNA (615bp) protein (205aa)
TetR family transcriptional regulator n=117 Tax=Pseudomonas RepID=G4LJG5_PSEAI
transcriptional regulator, TetR family
TetR family transcriptional regulator {ECO:0000313|EMBL:ERV79355.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
L3_114_000G1_scaffold_1744_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24266..24385
DNA (120bp) protein (40aa)
Uncharacterized protein n=80 Tax=Pseudomonas aeruginosa RepID=B7V870_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD46170.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
L3_114_000G1_scaffold_1744_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24402..24596
DNA (195bp) protein (65aa)
Uncharacterized protein n=126 Tax=Pseudomonas RepID=A6V4X7_PSEA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHW70981.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
L3_114_000G1_scaffold_1744_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24622..24894)
DNA (273bp) protein (91aa)
Uncharacterized protein n=96 Tax=Pseudomonas RepID=B7V868_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD46172.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
L3_114_000G1_scaffold_1744_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24992..25756
DNA (765bp) protein (255aa)
Helix-turn-helix domain protein n=34 Tax=Pseudomonas RepID=T2EIX4_PSEAI
Transcriptional regulator, AraC family
AraC family transcriptional regulator {ECO:0000313|EMBL:BAR67702.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
L3_114_000G1_scaffold_1744_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25783..26598
DNA (816bp) protein (272aa)
Transcriptional regulator, AraC family n=20 Tax=Pseudomonas aeruginosa RepID=U6A8R0_PSEAI
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:ETU95341.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
L3_114_000G1_scaffold_1744_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26679..27053
DNA (375bp) protein (125aa)
Uncharacterized protein n=99 Tax=Pseudomonas RepID=B7V865_PSEA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETU95340.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
Displaying 29 items

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