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L3_114_000G1_scaffold_4587

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_4587_1
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..316
DNA (315bp) protein (105aa)
Methyl-accepting chemotaxis protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAM7_9GAMM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EED37170.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
methyl-accepting chemotaxis sensory transducer with Cache sensor
L3_114_000G1_scaffold_4587_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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354..1223
DNA (870bp) protein (290aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
cheR; chemotaxis protein methyltransferase (EC:2.1.1.80)
Chemotaxis protein methyltransferase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMJ4_STEMA
L3_114_000G1_scaffold_4587_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1220..1816
DNA (597bp) protein (199aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Probable chemoreceptor glutamine deamidase CheD n=2 Tax=Stenotrophomonas RepID=CHED_STRM5
chemoreceptor glutamine deamidase CheD
L3_114_000G1_scaffold_4587_4
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1813..2886
DNA (1074bp) protein (358aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
cheB; chemotaxis-specific methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAN0_9GAMM
L3_114_000G1_scaffold_4587_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2970..4955
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CZD2_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP11527.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
L3_114_000G1_scaffold_4587_6
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5026..5451)
DNA (426bp) protein (142aa)
TonB family C-terminal domain protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAN2_9GAMM
TonB family C-terminal domain protein {ECO:0000313|EMBL:EED38207.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
TonB family protein
L3_114_000G1_scaffold_4587_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5569..8160)
DNA (2592bp) protein (864aa)
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E351F6
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
L3_114_000G1_scaffold_4587_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8205..8603)
DNA (399bp) protein (133aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas RepID=B4SHW5_STRM5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM51222.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
L3_114_000G1_scaffold_4587_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8610..8834)
DNA (225bp) protein (75aa)
Transcriptional regulator, AbrB family n=7 Tax=Stenotrophomonas maltophilia RepID=G0JYU8_STEMA
AbrB family transcriptional regulator
AbrB family transcriptional regulator {ECO:0000313|EMBL:EJP77411.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L3_114_000G1_scaffold_4587_10
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9136..11895
DNA (2760bp) protein (920aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
aconitate hydratase 1 (EC:4.2.1.3)
Aconitate hydratase 1 n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAN6_9GAMM
L3_114_000G1_scaffold_4587_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12056..12373)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYU6_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM51219.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
Displaying 11 items

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