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L3_114_000G1_scaffold_2324

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_2324_1
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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196..1236
DNA (1041bp) protein (347aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Stenotrophomonas RepID=B8L6D4_9GAMM
ruvB; Holliday junction DNA helicase RuvB
L3_114_000G1_scaffold_2324_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1226..1657
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMR3_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP11374.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
tol-pal system-associated acyl-CoA thioesterase
L3_114_000G1_scaffold_2324_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1668..2447
DNA (780bp) protein (260aa)
Protein TolQ n=3 Tax=Stenotrophomonas RepID=G0K067_STEMA
protein TolQ
Protein TolQ {ECO:0000313|EMBL:EED37700.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
L3_114_000G1_scaffold_2324_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2472..2900
DNA (429bp) protein (143aa)
Protein TolR n=4 Tax=Stenotrophomonas maltophilia RepID=G0K066_STEMA
protein TolR
Biopolymer transporter TolR {ECO:0000313|EMBL:EQM81733.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
L3_114_000G1_scaffold_2324_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2890..3942
DNA (1053bp) protein (351aa)
Colicin import membrane protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CYX8_STEMA
Colicin import membrane protein {ECO:0000313|EMBL:CCP11377.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
protein TolA
L3_114_000G1_scaffold_2324_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4133..5452
DNA (1320bp) protein (440aa)
Protein TolB n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLL4_STEMA
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
tolB; tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins
L3_114_000G1_scaffold_2324_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5517..6035
DNA (519bp) protein (173aa)
PAL family outer membrane lipoprotein n=5 Tax=Stenotrophomonas RepID=B8L6E0_9GAMM
peptidoglycan-associated lipoprotein
Putative peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:CAQ47118.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
L3_114_000G1_scaffold_2324_8
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6039..6857
DNA (819bp) protein (273aa)
Putative secreted protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6E1_9GAMM
Putative secreted protein {ECO:0000313|EMBL:EED38897.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
tol-pal system protein YbgF
L3_114_000G1_scaffold_2324_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7059..7760
DNA (702bp) protein (234aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CM80_STEMA
radical SAM-superfamily protein
L3_114_000G1_scaffold_2324_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7839..8504
DNA (666bp) protein (222aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K060_STEMA
exsB protein
L3_114_000G1_scaffold_2324_11
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8639..8926)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6E4_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED39492.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_2324_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9515..9940)
DNA (426bp) protein (142aa)
Uncharacterized HTH-type transcriptional regulator ydeP n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMS1_STEMA
Uncharacterized HTH-type transcriptional regulator ydeP {ECO:0000313|EMBL:CCP11385.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
helix-turn-helix protein
L3_114_000G1_scaffold_2324_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10140..10955
DNA (816bp) protein (272aa)
Isoflavone reductase {ECO:0000313|EMBL:CCP11386.1}; EC=1.3.1.45 {ECO:0000313|EMBL:CCP11386.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Isoflavone reductase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CM65_STEMA
oxidoreductase
L3_114_000G1_scaffold_2324_14
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11347..11664)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6E5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED39049.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_2324_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11743..12183)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CYZ2_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP11388.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
L3_114_000G1_scaffold_2324_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12464..13315
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLM5_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP11389.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
ferric-enterobactin hydrolase
L3_114_000G1_scaffold_2324_17
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13398..14336
DNA (939bp) protein (313aa)
Putative esterase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6F0_9GAMM
Putative esterase {ECO:0000313|EMBL:EED39848.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
esterase
L3_114_000G1_scaffold_2324_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14404..14826)
DNA (423bp) protein (141aa)
Response regulator {ECO:0000313|EMBL:CCP11391.1}; EC=2.7.3.- {ECO:0000313|EMBL:CCP11391.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Response regulator n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CM70_STEMA
response regulator
L3_114_000G1_scaffold_2324_19
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14919..15686)
DNA (768bp) protein (256aa)
CAAX amino terminal protease family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6F2_9GAMM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EED37250.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
abortive infection protein
L3_114_000G1_scaffold_2324_20
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15836..16150
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6F3_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED39689.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_2324_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16268..16780)
DNA (513bp) protein (171aa)
Protease synthase and sporulation negative regulatory protein PAI 1 {ECO:0000313|EMBL:CCP11394.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCP11394.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Protease synthase and sporulation negative regulatory protein PAI 1 n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLN1_STEMA
acetyltransferase
L3_114_000G1_scaffold_2324_22
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16862..17842)
DNA (981bp) protein (327aa)
Copper resistance protein B n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6F5_9GAMM
Copper resistance protein B {ECO:0000313|EMBL:EED41273.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
copper resistance B
L3_114_000G1_scaffold_2324_23
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17839..19662)
DNA (1824bp) protein (608aa)
Multicopper oxidase type 1 n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6F6_9GAMM
Multicopper oxidase type 1 {ECO:0000313|EMBL:EED37675.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
copA2; multicopper oxidase
L3_114_000G1_scaffold_2324_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19738..20121)
DNA (384bp) protein (128aa)
regulator of copper resistance n=1 Tax=Pseudomonas geniculata RepID=UPI00029A9D59
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:ACF52803.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
L3_114_000G1_scaffold_2324_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20289..22094)
DNA (1806bp) protein (602aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CCP11399.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCP11399.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
ATP-dependent DNA helicase RecQ n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CM95_STEMA
ATP-dependent DNA helicase RecQ
Displaying 25 items

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