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L3_114_000G1_scaffold_3223

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_3223_1
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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526..1911
DNA (1386bp) protein (462aa)
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16)
Aldehyde-dehydrogenase like protein YneI n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAP8_9GAMM
Aldehyde-dehydrogenase like protein YneI {ECO:0000313|EMBL:EED41215.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
L3_114_000G1_scaffold_3223_2
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1975..3615
DNA (1641bp) protein (547aa)
Acetolactate synthase, catabolic {ECO:0000313|EMBL:EED39654.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EED39654.1};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
ilvK; acetolactate synthase (EC:2.2.1.6)
Acetolactate synthase, catabolic n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAP7_9GAMM
L3_114_000G1_scaffold_3223_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3829..5340
DNA (1512bp) protein (504aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Lysine--tRNA ligase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CZA4_STEMA
lysS; lysyl-tRNA synthetase
L3_114_000G1_scaffold_3223_4
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5546..6685
DNA (1140bp) protein (380aa)
Response regulator CheB {ECO:0000313|EMBL:EED39950.1}; EC=3.1.1.61 {ECO:0000313|EMBL:EED39950.1};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Response regulator CheB n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAP5_9GAMM
response regulator receiver modulated metal dependent phosphohydrolase
L3_114_000G1_scaffold_3223_5
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6687..9410
DNA (2724bp) protein (908aa)
Sensory/regulatory protein RpfC n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAP3_9GAMM
Sensory/regulatory protein RpfC {ECO:0000313|EMBL:EED37181.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
multi-sensor hybrid histidine kinase
L3_114_000G1_scaffold_3223_6
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9423..10292)
DNA (870bp) protein (290aa)
Enoyl-CoA hydratase/isomerase family protein RpfF {ECO:0000313|EMBL:EED38336.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EED38336.1};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Enoyl-CoA hydratase/isomerase family protein RpfF n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAP2_9GAMM
enoyl-CoA hydratase
L3_114_000G1_scaffold_3223_7
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10492..12168)
DNA (1677bp) protein (559aa)
Long-chain-fatty-acid-CoA-ligase RpfB {ECO:0000313|EMBL:EED37864.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EED37864.1};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Long-chain-fatty-acid-CoA-ligase RpfB n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAP1_9GAMM
fadD; long-chain fatty acyl CoA ligase
L3_114_000G1_scaffold_3223_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12346..14025)
DNA (1680bp) protein (560aa)
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC=1.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054587};; Betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
choline dehydrogenase (EC:1.1.99.1)
Oxygen-dependent choline dehydrogenase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CZA9_STEMA
L3_114_000G1_scaffold_3223_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14127..15599)
DNA (1473bp) protein (491aa)
betaine aldehyde dehydrogenase (EC:1.2.1.8)
NAD/NADP-dependent betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00804}; Short=BADH {ECO:0000256|HAMAP-Rule:MF_00804};; EC=1.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00804};; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
NAD/NADP-dependent betaine aldehyde dehydrogenase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYU3_STEMA
L3_114_000G1_scaffold_3223_10
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15639..16229)
DNA (591bp) protein (197aa)
HTH-type transcriptional regulator BetI n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYU4_STEMA
TetR family transcriptional regulator
HTH-type transcriptional regulator BetI {ECO:0000256|HAMAP-Rule:MF_00768}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
L3_114_000G1_scaffold_3223_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16400..16534
DNA (135bp) protein (45aa)
Choline/carnitine/betaine transporter n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SHW2_STRM5
choline/carnitine/betaine transporter
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:ACF51539.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
L3_114_000G1_scaffold_3223_12
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16550..17005
DNA (456bp) protein (152aa)
Choline/carnitine/betaine transporter n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAN7_9GAMM
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:EED37008.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
choline/carnitine/betaine transporter
Displaying 12 items

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