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L3_114_000G1_scaffold_1064

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_1064_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..108
DNA (108bp) protein (36aa)
Flagellin n=2 Tax=Stenotrophomonas maltophilia RepID=T5KW92_STEMA
flagellin
Flagellin {ECO:0000313|EMBL:KDE89669.1}; Flags: Fragment;; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
L3_114_000G1_scaffold_1064_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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550..1968
DNA (1419bp) protein (473aa)
Flagellar hook-associated protein 2 n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMS7_STEMA
Flagellar hook-associated protein 2 {ECO:0000313|EMBL:CCP11580.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
flagellar hook-associated 2 domain-containing protein
L3_114_000G1_scaffold_1064_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2097..2513
DNA (417bp) protein (139aa)
Flagellar protein FliS n=2 Tax=Stenotrophomonas RepID=B8LBB0_9GAMM
Flagellar protein fliS {ECO:0000313|EMBL:CCP11579.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
flagellar protein FliS
L3_114_000G1_scaffold_1064_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2510..2803
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CN67_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP11578.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
L3_114_000G1_scaffold_1064_5
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2800..3378
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LBB1_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED40791.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_1064_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3465..4103
DNA (639bp) protein (213aa)
Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas maltophilia RepID=G0JZE0_STEMA
two component LuxR family transcriptional regulator
Response regulator {ECO:0000313|EMBL:EQM87918.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
L3_114_000G1_scaffold_1064_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4521..5930
DNA (1410bp) protein (470aa)
RNA polymerase sigma-54 factor n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CZK0_STEMA
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
RNA polymerase sigma-54 subunit RpoN
L3_114_000G1_scaffold_1064_8
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5945..6322
DNA (378bp) protein (126aa)
Response regulator receiver protein n=4 Tax=Stenotrophomonas RepID=G0JZD8_STEMA
response regulator
Response regulator {ECO:0000313|EMBL:EED37699.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
L3_114_000G1_scaffold_1064_9
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6319..7824
DNA (1506bp) protein (502aa)
Sigma-54 dependent DNA-binding reponse regulator CrdA n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LBB5_9GAMM
Sigma-54 dependent DNA-binding reponse regulator CrdA {ECO:0000313|EMBL:EED39554.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
flagellar regulatory protein FleQ
L3_114_000G1_scaffold_1064_10
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7997..8413
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LBB6_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED38984.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_1064_11
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8900..9268
DNA (369bp) protein (123aa)
Flagellar hook-basal body complex protein FliE n=2 Tax=Stenotrophomonas RepID=B8LBB7_9GAMM
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
flagellar hook-basal body complex protein fliE
L3_114_000G1_scaffold_1064_12
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9282..10925
DNA (1644bp) protein (548aa)
Flagellar M-ring protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LBB8_9GAMM
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
flagellar M-ring protein FliF
L3_114_000G1_scaffold_1064_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10918..11919
DNA (1002bp) protein (334aa)
Flagellar motor switch protein FliG n=9 Tax=Stenotrophomonas RepID=B2FQT0_STRMK
flagellar motor switch protein FliG
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
L3_114_000G1_scaffold_1064_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11916..12557
DNA (642bp) protein (214aa)
Flagellar assembly protein fliH n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMM9_STEMA
Flagellar assembly protein fliH {ECO:0000313|EMBL:CCP11569.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
fliH; flagellar assembly protein FliH
L3_114_000G1_scaffold_1064_15
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12554..13951
DNA (1398bp) protein (466aa)
Flagellar protein export ATPase FliI {ECO:0000313|EMBL:EED40011.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EED40011.1};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Flagellar protein export ATPase FliI n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LBC1_9GAMM
flagellar protein export ATPase FliI
L3_114_000G1_scaffold_1064_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13955..14422
DNA (468bp) protein (156aa)
Flagellar export protein FliJ n=2 Tax=Stenotrophomonas RepID=B8LBC2_9GAMM
Flagellar FliJ protein {ECO:0000313|EMBL:CCP11566.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
flagellar export protein FliJ
L3_114_000G1_scaffold_1064_17
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14422..15579
DNA (1158bp) protein (386aa)
Flagellar protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LBC3_9GAMM
Flagellar protein {ECO:0000313|EMBL:EED39163.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
flagellar hook-length control protein
L3_114_000G1_scaffold_1064_18
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15732..16247
DNA (516bp) protein (172aa)
Flagellar basal body-associated protein FliL n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LBC4_9GAMM
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:EED39772.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
fliL; flagellar basal body-associated protein FliL
L3_114_000G1_scaffold_1064_19
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16258..17262
DNA (1005bp) protein (335aa)
Flagellar motor switch protein FliM n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LBC5_9GAMM
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
fliM; flagellar motor switch protein FliM
L3_114_000G1_scaffold_1064_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17259..17594
DNA (336bp) protein (112aa)
Flagellar motor switch protein FliN n=10 Tax=Stenotrophomonas RepID=G0JZC6_STEMA
fliN; flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:EJP76461.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
L3_114_000G1_scaffold_1064_21
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17591..18010
DNA (420bp) protein (140aa)
Flagellar protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAS3_9GAMM
fliO; flagellar biosynthesis protein FliO
Flagellar protein {ECO:0000313|EMBL:EED38760.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
L3_114_000G1_scaffold_1064_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18012..18791
DNA (780bp) protein (260aa)
Flagellar biosynthesis protein FliP {ECO:0000313|EMBL:CCP11558.1}; EC=3.1.1.3 {ECO:0000313|EMBL:CCP11558.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
fliP; flagellar biosynthesis protein FliP (EC:3.1.1.3)
Flagellar biosynthesis protein FliP n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMP5_STEMA
L3_114_000G1_scaffold_1064_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18876..19145
DNA (270bp) protein (90aa)
Export protein FliQ family 3 n=8 Tax=Stenotrophomonas maltophilia RepID=G0JZC3_STEMA
export protein FliQ family 3
Flagellar biosynthesis {ECO:0000313|EMBL:EQM78768.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
L3_114_000G1_scaffold_1064_24
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19159..19950
DNA (792bp) protein (264aa)
Flagellar biosynthetic protein fliR n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAS6_9GAMM
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
flagellar biosynthetic protein FliR
L3_114_000G1_scaffold_1064_25
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20116..22248
DNA (2133bp) protein (711aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAS7_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED41053.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
diguanylate cyclase/phosphodiesterase
L3_114_000G1_scaffold_1064_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22387..23517
DNA (1131bp) protein (377aa)
Flagellar biosynthetic protein FlhB n=2 Tax=Stenotrophomonas RepID=B8LAS8_9GAMM
Flagellar biosynthetic protein flhB {ECO:0000313|EMBL:CCP11553.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
flagellar biosynthetic protein FlhB
L3_114_000G1_scaffold_1064_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23514..25622
DNA (2109bp) protein (703aa)
Flagellar biosynthesis protein flhA n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CML5_STEMA
Flagellar biosynthesis protein flhA {ECO:0000313|EMBL:CCP11552.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
flhA; flagellar biosynthesis protein FlhA
L3_114_000G1_scaffold_1064_28
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25768..27384
DNA (1617bp) protein (539aa)
Flagellar biosynthetic protein FlhF n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAT0_9GAMM
Flagellar biosynthetic protein FlhF {ECO:0000313|EMBL:EED38818.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
flagellar biosynthetic protein FlhF
L3_114_000G1_scaffold_1064_29
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27371..28258
DNA (888bp) protein (296aa)
Site-determining protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAT1_9GAMM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
ParA family ATPase flagella number regulator
L3_114_000G1_scaffold_1064_30
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28255..28998
DNA (744bp) protein (248aa)
RNA polymerase sigma factor FliA n=2 Tax=Stenotrophomonas maltophilia RepID=B2FQC0_STRMK
fliA; RNA polymerase sigma factor for flagellar regulon FliA
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
Displaying items 1-30 of 41 in total

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