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L3_114_000G1_scaffold_1150

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_1150_1
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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270..1166
DNA (897bp) protein (299aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L299_9GAMM
L3_114_000G1_scaffold_1150_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1166..2119
DNA (954bp) protein (318aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000255|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; Short=DMAPP:tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185};; Short=DMATase {ECO:0000255|HAMAP-Rule:MF_00185};; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; Short=IPP transferase {ECO:0000255|HAMAP-Rule:MF_00185};; Short=IPPT {ECO:0000255|HAMAP-Rule:MF_00185};; Short=IPTase {ECO:0000255|HAMAP-Rule:MF_00185};; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
tRNA dimethylallyltransferase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=MIAA_STRMK
L3_114_000G1_scaffold_1150_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2216..2491
DNA (276bp) protein (92aa)
RNA-binding protein Hfq n=11 Tax=Stenotrophomonas RepID=HFQ_STRM5
hfq; RNA-binding protein Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
L3_114_000G1_scaffold_1150_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2506..3816
DNA (1311bp) protein (437aa)
GTPase HflX n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLH5_STEMA
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hflX; GTP-binding phage-like protein
L3_114_000G1_scaffold_1150_5
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3933..4433
DNA (501bp) protein (167aa)
CinA domain protein n=5 Tax=Stenotrophomonas RepID=B8L295_9GAMM
CinA domain-containing protein
CinA domain protein {ECO:0000313|EMBL:EED38235.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
L3_114_000G1_scaffold_1150_6
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4465..6150
DNA (1686bp) protein (562aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
2-polyprenylphenol 6-hydroxylase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L294_9GAMM
2-polyprenylphenol 6-hydroxylase
L3_114_000G1_scaffold_1150_7
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6359..6994
DNA (636bp) protein (212aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
LexA repressor n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L293_9GAMM
SOS-response transcriptional repressor, LexA
L3_114_000G1_scaffold_1150_8
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7199..8236
DNA (1038bp) protein (346aa)
Protein RecA n=2 Tax=Stenotrophomonas RepID=B8L292_9GAMM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
protein recA
L3_114_000G1_scaffold_1150_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8347..8838
DNA (492bp) protein (164aa)
Regulatory protein RecX n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CKW9_STEMA
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
regulatory protein recX
L3_114_000G1_scaffold_1150_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8948..11596
DNA (2649bp) protein (883aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
Alanine--tRNA ligase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JVH7_STEMA
alanyl-tRNA synthetase
L3_114_000G1_scaffold_1150_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11744..11947
DNA (204bp) protein (68aa)
Carbon storage regulator homolog n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLI9_STEMA
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
carbon starvation protein CstA
L3_114_000G1_scaffold_1150_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12209..12658)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CY20_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP10991.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
L3_114_000G1_scaffold_1150_13
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12778..15108)
DNA (2331bp) protein (777aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L285_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EED37179.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
TonB-dependent receptor
L3_114_000G1_scaffold_1150_14
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15214..16182
DNA (969bp) protein (323aa)
Transcriptional regulator n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L284_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EED37480.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
AraC family transcriptional regulator
L3_114_000G1_scaffold_1150_15
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16294..18045
DNA (1752bp) protein (584aa)
Ferric alcaligin siderophore receptor n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L283_9GAMM
Ferric alcaligin siderophore receptor {ECO:0000313|EMBL:EED39068.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
TonB-dependent siderophore receptor
L3_114_000G1_scaffold_1150_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18026..18463
DNA (438bp) protein (146aa)
FauA protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLI5_STEMA
FauA protein {ECO:0000313|EMBL:CCP10996.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
TonB-dependent siderophore receptor
L3_114_000G1_scaffold_1150_17
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18587..19069
DNA (483bp) protein (161aa)
Transcriptional regulator, LuxR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L282_9GAMM
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EED40240.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_1150_18
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19126..21801)
DNA (2676bp) protein (892aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
2-oxoacid dehydrogenase subunit E1 (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L281_9GAMM
L3_114_000G1_scaffold_1150_19
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22095..24203)
DNA (2109bp) protein (703aa)
Phospholipase C, phosphocholine-specific {ECO:0000313|EMBL:EED38600.1}; EC=3.1.4.3 {ECO:0000313|EMBL:EED38600.1};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
phospholipase C, phosphocholine-specific (EC:3.1.4.3)
Phospholipase C, phosphocholine-specific n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L276_9GAMM
L3_114_000G1_scaffold_1150_20
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24212..26590)
DNA (2379bp) protein (793aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L275_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EED41140.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
TonB dependent receptor protein
L3_114_000G1_scaffold_1150_21
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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26741..28270
DNA (1530bp) protein (510aa)
OmpA/MotB domain protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L274_9GAMM
OmpA/MotB domain protein {ECO:0000313|EMBL:EED38136.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
flagellar motor protein MotB
L3_114_000G1_scaffold_1150_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28283..29209)
DNA (927bp) protein (309aa)
Putative cytochrome c {ECO:0000313|EMBL:CCP11008.1}; EC=1.1.99.3 {ECO:0000313|EMBL:CCP11008.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Putative cytochrome c n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CM91_STEMA
cytochrome c family protein
L3_114_000G1_scaffold_1150_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29206..30552)
DNA (1347bp) protein (449aa)
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:CCP11009.1}; EC=1.1.99.3 {ECO:0000313|EMBL:CCP11009.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Gluconate 2-dehydrogenase (Acceptor) n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLJ1_STEMA
adhB; alcohol dehydrogenase cytochrome c subunit
L3_114_000G1_scaffold_1150_24
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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30738..31892
DNA (1155bp) protein (385aa)
Hydrolase, alpha/beta fold family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L271_9GAMM
Hydrolase, alpha/beta fold family protein {ECO:0000313|EMBL:EED40972.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
exported alpha/beta hydrolase fold protein
L3_114_000G1_scaffold_1150_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31976..33145)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7VFA8_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP76944.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
major facilitator superfamily protein
L3_114_000G1_scaffold_1150_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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33300..33995
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CKZ5_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP11012.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
esterase/lipase/thioesterase domain-containing protein
L3_114_000G1_scaffold_1150_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34141..36345
DNA (2205bp) protein (735aa)
FhuE receptor n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CM93_STEMA
FhuE receptor {ECO:0000313|EMBL:CCP11013.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
ferric siderophore receptor protein
L3_114_000G1_scaffold_1150_28
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36400..37101)
DNA (702bp) protein (234aa)
Pirin, N-terminal domain protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L267_9GAMM
Pirin, N-terminal domain protein {ECO:0000313|EMBL:EED41387.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Pirin domain-containing protein
L3_114_000G1_scaffold_1150_29
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37242..38162
DNA (921bp) protein (307aa)
Transcriptional regulator n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L266_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EED38027.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
LysR family transcriptional regulator
Displaying 29 items

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