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L3_114_000G1_scaffold_1277

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_1277_1
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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502..2106
DNA (1605bp) protein (535aa)
Putative permease n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L690_9GAMM
Putative permease {ECO:0000313|EMBL:EED40206.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
sulfate transporter
L3_114_000G1_scaffold_1277_2
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2397..3107)
DNA (711bp) protein (237aa)
Glutathione transferase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L691_9GAMM
Glutathione transferase {ECO:0000313|EMBL:EED37882.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
glutathione S-transferase
L3_114_000G1_scaffold_1277_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3280..4107
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L692_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED39436.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_1277_4
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4182..5534
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6A5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED37924.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
L3_114_000G1_scaffold_1277_5
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5542..6639)
DNA (1098bp) protein (366aa)
Di-heme cytochrome c peroxidase family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6A6_9GAMM
Di-heme cytochrome c peroxidase family protein {ECO:0000313|EMBL:EED37593.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
cytochrome-c peroxidase
L3_114_000G1_scaffold_1277_6
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6675..7028)
DNA (354bp) protein (118aa)
TonB dependent receptor, putative n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6A7_9GAMM
TonB dependent receptor, putative {ECO:0000313|EMBL:EED40500.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
outer membrane receptor for ferrienterochelin and colicins
L3_114_000G1_scaffold_1277_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6980..9463)
DNA (2484bp) protein (828aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMP4_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP11346.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
L3_114_000G1_scaffold_1277_8
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9517..10485)
DNA (969bp) protein (323aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6A8_9GAMM
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EED39940.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
anti-FecI sigma factor FecR
L3_114_000G1_scaffold_1277_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10475..10969)
DNA (495bp) protein (165aa)
RNA polymerase sigma factor sigX n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CM53_STEMA
RNA polymerase sigma factor sigX {ECO:0000313|EMBL:CCP11348.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
ECF subfamily RNA polymerase sigma-24 factor
L3_114_000G1_scaffold_1277_10
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11222..13807
DNA (2586bp) protein (862aa)
ATP-dependent chaperone ClpB n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6B0_9GAMM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
ATP-dependent chaperone ClpB
L3_114_000G1_scaffold_1277_11
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13880..14680)
DNA (801bp) protein (267aa)
MltA-interacting protein MipA family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6B1_9GAMM
MltA-interacting protein MipA family {ECO:0000313|EMBL:EED37827.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
MltA-interacting MipA family protein
L3_114_000G1_scaffold_1277_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14821..16110)
DNA (1290bp) protein (430aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Two-component system, OmpR family, sensor kinase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLJ0_STEMA
integral membrane sensor signal transduction histidine kinase
L3_114_000G1_scaffold_1277_13
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16107..16844)
DNA (738bp) protein (246aa)
Two component Transcriptional regulator, Winged helix family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6B3_9GAMM
Two component Transcriptional regulator, Winged helix family {ECO:0000313|EMBL:EED41389.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
transcriptional regulator RstA
L3_114_000G1_scaffold_1277_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17027..17146
DNA (120bp) protein (40aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:AEM52493.1}; EC=2.5.1.47 {ECO:0000313|EMBL:AEM52493.1};; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KCF3_STEMA
O-acetylhomoserine (thiol)-lyase
L3_114_000G1_scaffold_1277_15
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17127..18314
DNA (1188bp) protein (396aa)
Homocysteine synthase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6B4_9GAMM
Homocysteine synthase {ECO:0000313|EMBL:EED38151.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
O-acetylhomoserine (thiol)-lyase
L3_114_000G1_scaffold_1277_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18605..20302)
DNA (1698bp) protein (566aa)
Glutathione-regulated potassium-efflux system protein kefC n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CM37_STEMA
Glutathione-regulated potassium-efflux system protein kefC {ECO:0000313|EMBL:CCP11354.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Glutathione-regulated potassium-efflux system protein KefB
L3_114_000G1_scaffold_1277_17
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20503..22890)
DNA (2388bp) protein (796aa)
Ferric enterobactin receptor n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6B6_9GAMM
Ferric enterobactin receptor {ECO:0000313|EMBL:EED38776.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
TonB dependent receptor protein
L3_114_000G1_scaffold_1277_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23228..25093
DNA (1866bp) protein (622aa)
Uncharacterized ABC transporter ATP-binding protein yheS n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CYV3_STEMA
Uncharacterized ABC transporter ATP-binding protein yheS {ECO:0000313|EMBL:CCP11356.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
ABC transporter
L3_114_000G1_scaffold_1277_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25172..26038)
DNA (867bp) protein (289aa)
AmpR n=1 Tax=Stenotrophomonas maltophilia RepID=B8LF87_STEMA
AmpR {ECO:0000313|EMBL:ACM10022.1}; LysR transcriptional factor {ECO:0000313|EMBL:ACH95426.2}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
LysR family transcriptional regulator
L3_114_000G1_scaffold_1277_20
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26213..27127
DNA (915bp) protein (305aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
beta-lactamase (EC:3.5.2.6)
Beta-lactamase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6C1_9GAMM
L3_114_000G1_scaffold_1277_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27213..28427
DNA (1215bp) protein (405aa)
Sodium/hydrogen exchanger n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K080_STEMA
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:AEM52487.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
L3_114_000G1_scaffold_1277_22
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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28480..29118
DNA (639bp) protein (213aa)
Secreted protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6C4_9GAMM
Secreted protein {ECO:0000313|EMBL:EED38487.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_1277_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29186..29926)
DNA (741bp) protein (247aa)
Conserved hypothetical exported protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FRP2_STRMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM52485.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
L3_114_000G1_scaffold_1277_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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30084..31835
DNA (1752bp) protein (584aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:CCP11365.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CCP11365.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CM46_STEMA
L3_114_000G1_scaffold_1277_25
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31852..32175
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas RepID=M5CM66_STEMA
Putative uncharacterized protein {ECO:0000313|EMBL:EED38631.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_1277_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32207..32728
DNA (522bp) protein (174aa)
Acetyltransferase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KTR6_STEMA
acetyltransferase-GNAT family
Acetyltransferase {ECO:0000313|EMBL:EQM81725.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
L3_114_000G1_scaffold_1277_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32804..33436
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLK4_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP11368.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
alpha/beta hydrolase fold domain-containing protein
L3_114_000G1_scaffold_1277_28
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33599..34330
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein SSKA14_3953 n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6D0_9GAMM
Probable transcriptional regulatory protein SSKA14_3953 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_1277_29
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34435..34956
DNA (522bp) protein (174aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6D1_9GAMM
L3_114_000G1_scaffold_1277_30
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34970..35563
DNA (594bp) protein (198aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Holliday junction ATP-dependent DNA helicase RuvA n=5 Tax=Stenotrophomonas RepID=RUVA_STRMK
ruvA; Holliday junction DNA helicase RuvA
Displaying items 1-30 of 32 in total

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