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L3_114_000G1_scaffold_1533

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_1533_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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244..780
DNA (537bp) protein (179aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
Adenine phosphoribosyltransferase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JWI1_STEMA
adenine phosphoribosyltransferase
L3_114_000G1_scaffold_1533_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(955..2331)
DNA (1377bp) protein (459aa)
ATP-dependent RNA helicase DbpA n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3DPZ5_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77174.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
dbpA; ATP-dependent RNA helicase DbpA
L3_114_000G1_scaffold_1533_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2416..3495)
DNA (1080bp) protein (360aa)
Membrane protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L1T7_9GAMM
Membrane protein {ECO:0000313|EMBL:EED37502.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_1533_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3598..4473
DNA (876bp) protein (292aa)
Transcriptional regulator, LysR family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SST7_STRM5
LysR family transcriptional regulator
Putative RuBisCO transcriptional regulator {ECO:0000313|EMBL:CCP16179.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
L3_114_000G1_scaffold_1533_5
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4762..6642
DNA (1881bp) protein (627aa)
ABC transporter ATP-binding protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L1T5_9GAMM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EED38330.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
uup; ABC transporter ATP-binding protein
L3_114_000G1_scaffold_1533_6
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6789..8192)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI00035D42B6
Uncharacterized protein {ECO:0000313|EMBL:EWC51489.1}; TaxID=1401257 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. glycines str. 8ra.;"
RelA/SpoT domain-containing protein
L3_114_000G1_scaffold_1533_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8271..8732)
DNA (462bp) protein (154aa)
Nitrite reductase {ECO:0000313|EMBL:CCP10908.1}; EC=1.7.99.1 {ECO:0000313|EMBL:CCP10908.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Cytochrome C552 n=2 Tax=Stenotrophomonas RepID=B8L1T4_9GAMM
cytochrome c class I
L3_114_000G1_scaffold_1533_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8742..9131)
DNA (390bp) protein (130aa)
Cytochrome C4 n=2 Tax=Stenotrophomonas maltophilia RepID=M3DPZ9_STEMA
cytochrome c
Putative cytochrome c {ECO:0000313|EMBL:CAQ45540.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
L3_114_000G1_scaffold_1533_9
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9337..10488
DNA (1152bp) protein (384aa)
Membrane fusion protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L1T2_9GAMM
Membrane fusion protein {ECO:0000313|EMBL:EED39555.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
RND family efflux transporter MFP subunit
L3_114_000G1_scaffold_1533_10
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10485..14006
DNA (3522bp) protein (1174aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L1T1_9GAMM
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EED40534.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
smmH; transmembrane ACR-type efflux transport protein
L3_114_000G1_scaffold_1533_11
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14003..17089
DNA (3087bp) protein (1029aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L1T0_9GAMM
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EED37780.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
smmI; transmembrane ACR-type efflux transport protein
L3_114_000G1_scaffold_1533_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17265..18485)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLC2_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP10916.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
TraB family protein
L3_114_000G1_scaffold_1533_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18490..19020)
DNA (531bp) protein (177aa)
Phosphinothricin acetyltransferase {ECO:0000313|EMBL:CCP10917.1}; EC=2.3.1.183 {ECO:0000313|EMBL:CCP10917.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Phosphinothricin acetyltransferase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLC4_STEMA
phosphinothricin N-acetyltransferase
L3_114_000G1_scaffold_1533_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19035..19922)
DNA (888bp) protein (296aa)
N-carbamoylputrescine amidase {ECO:0000313|EMBL:CCP10918.1}; EC=3.5.1.53 {ECO:0000313|EMBL:CCP10918.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
N-carbamoylputrescine amidase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CXS3_STEMA
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
L3_114_000G1_scaffold_1533_15
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20085..21122)
DNA (1038bp) protein (346aa)
Agmatine deiminase {ECO:0000313|EMBL:EED38745.1}; EC=3.5.3.12 {ECO:0000313|EMBL:EED38745.1};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
agmatine deiminase (EC:3.5.3.12)
Agmatine deiminase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L1S6_9GAMM
L3_114_000G1_scaffold_1533_16
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21165..21494)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas RepID=M5CM07_STEMA
Putative uncharacterized protein {ECO:0000313|EMBL:EED37493.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
L3_114_000G1_scaffold_1533_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21641..21766)
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=11 Tax=Stenotrophomonas RepID=RL36_STRM5
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
L3_114_000G1_scaffold_1533_18
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21964..22641
DNA (678bp) protein (226aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L1S3_9GAMM
L3_114_000G1_scaffold_1533_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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22840..24525
DNA (1686bp) protein (562aa)
30S ribosomal protein S1 n=6 Tax=Stenotrophomonas RepID=G0JX62_STEMA
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
rpsA; 30S ribosomal protein S1
L3_114_000G1_scaffold_1533_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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24614..24919
DNA (306bp) protein (102aa)
Integration host factor subunit beta n=11 Tax=Stenotrophomonas RepID=IHFB_STRM5
ihfB; integration host factor subunit beta
Integration host factor subunit beta {ECO:0000255|HAMAP-Rule:MF_00381}; Short=IHF-beta {ECO:0000255|HAMAP-Rule:MF_00381};; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
L3_114_000G1_scaffold_1533_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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24997..25281
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas RepID=M5CM11_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP10925.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
transmembrane protein
L3_114_000G1_scaffold_1533_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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25288..26466
DNA (1179bp) protein (393aa)
Heat shock protein n=2 Tax=Stenotrophomonas RepID=B8L1R9_9GAMM
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
L3_114_000G1_scaffold_1533_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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26470..27459
DNA (990bp) protein (330aa)
Lipopolysaccharide core biosynthesis protein {ECO:0000313|EMBL:CCP10927.1}; EC=2.-.-.- {ECO:0000313|EMBL:CCP10927.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Lipopolysaccharide core biosynthesis protein n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CLD4_STEMA
glycosyl transferase family protein
L3_114_000G1_scaffold_1533_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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27463..29376
DNA (1914bp) protein (638aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JX67_STEMA
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:AEM51026.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
polysaccharide biosynthesis protein CapD
L3_114_000G1_scaffold_1533_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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29373..30251
DNA (879bp) protein (293aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CKR8_STEMA
L3_114_000G1_scaffold_1533_26
unknown

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comp(30631..30807)
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 26 items

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