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L3_114_000G1_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 166 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_36_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

87..1175
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y0X1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24894.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_114_000G1_scaffold_36_2
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1459..4182
DNA (2724bp) protein (908aa)
Putative halomucin n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2L0_9CLOT
Putative halomucin {ECO:0000313|EMBL:CDE70121.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_36_3
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4326..5480
DNA (1155bp) protein (385aa)
Fibronectin type III domain protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1F7_9CLOT
Fibronectin type III domain protein {ECO:0000313|EMBL:CDE70120.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_36_4
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5596..6021)
DNA (426bp) protein (142aa)
Aspartate transcarbamylase regulatory subunit n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1K4_9CLOT
Aspartate transcarbamylase regulatory subunit {ECO:0000313|EMBL:CDE70119.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
aspartate carbamoyltransferase
L3_114_000G1_scaffold_36_5
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6015..6938)
DNA (924bp) protein (308aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2Q2_9CLOT
L3_114_000G1_scaffold_36_6
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7136..9424
DNA (2289bp) protein (763aa)
Aconitate hydratase domain protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K531_9CLOT
Aconitate hydratase domain protein {ECO:0000313|EMBL:CDE70117.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_36_7
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10110..11054
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2K6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70116.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_36_8
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11116..11604
DNA (489bp) protein (163aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1F2_9CLOT
L3_114_000G1_scaffold_36_9
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11992..12660
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1J9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70114.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_36_10
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12686..13411
DNA (726bp) protein (242aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2P6_9CLOT
L3_114_000G1_scaffold_36_11
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13413..15371
DNA (1959bp) protein (653aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K523_9CLOT
L3_114_000G1_scaffold_36_12
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15472..16419
DNA (948bp) protein (316aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2K1_9CLOT
L3_114_000G1_scaffold_36_13
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16705..17190
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1E6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70110.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
L3_114_000G1_scaffold_36_14
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17180..19069
DNA (1890bp) protein (630aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1J4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70109.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_36_15
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19092..20807
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2P1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70108.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hydrogenase, Fe-only
L3_114_000G1_scaffold_36_16
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20931..21320
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VM19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC95304.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_114_000G1_scaffold_36_17
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21262..22887)
DNA (1626bp) protein (542aa)
Polysaccharide biosynthesis protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VAK1_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDC95303.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
polysaccharide biosynthesis protein
L3_114_000G1_scaffold_36_18
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23025..24164
DNA (1140bp) protein (380aa)
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2J7_9CLOT
Cysteine desulfurase NifS {ECO:0000313|EMBL:CDE70106.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_36_19
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24159..25025)
DNA (867bp) protein (289aa)
Histidinol phosphatase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1E1_9CLOT
Histidinol phosphatase {ECO:0000313|EMBL:CDE70105.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
histidinol phosphatase
L3_114_000G1_scaffold_36_20
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25054..26844)
DNA (1791bp) protein (597aa)
Predicted RNA-binding protein homologous to eukaryotic snRNP n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1I9_9CLOT
Predicted RNA-binding protein homologous to eukaryotic snRNP {ECO:0000313|EMBL:CDE70104.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Predicted RNA-binding protein homologous to eukaryotic snRNP
L3_114_000G1_scaffold_36_21
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26998..27738
DNA (741bp) protein (247aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
Putative acyltransferase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2N6_9CLOT
Putative acyltransferase {ECO:0000313|EMBL:CDE70103.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_36_22
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27861..28292
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K513_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70102.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_36_23
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28252..28476
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2J1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70101.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_36_24
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28491..29747)
DNA (1257bp) protein (419aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1D6_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDE70100.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_36_25
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29931..31364
DNA (1434bp) protein (478aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1I5_9CLOT
Propionyl-CoA carboxylase {ECO:0000313|EMBL:CDE70099.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_36_26
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31380..32102
DNA (723bp) protein (241aa)
Oxaloacetate decarboxylase gamma chain n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2N0_9CLOT
Oxaloacetate decarboxylase gamma chain {ECO:0000313|EMBL:CDE70098.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
sodium pump decarboxylases, gamma subunit
L3_114_000G1_scaffold_36_27
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32147..32509
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K506_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70097.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
oxaloacetate decarboxylase
L3_114_000G1_scaffold_36_28
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32528..33676
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2I5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70096.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
glutaconyl-CoA decarboxylase
L3_114_000G1_scaffold_36_29
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33692..35116
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1D3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70095.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
oxaloacetate decarboxylase
L3_114_000G1_scaffold_36_30
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35276..35536)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1I2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70094.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
Displaying items 1-30 of 166 in total

View Taxonomy