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L3_114_000G1_scaffold_282

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_282_1
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(235..843)
DNA (609bp) protein (203aa)
Phosphotransferase enzyme family n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1Q3_9CLOT
Phosphotransferase enzyme family {ECO:0000313|EMBL:CDE69821.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Phosphotransferase enzyme family.
L3_114_000G1_scaffold_282_2
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(843..1469)
DNA (627bp) protein (209aa)
putative acetyltransferase (EC:2.3.1.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K4A2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69822.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_282_3
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1625..2485
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1Y4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69823.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_282_4
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2478..4232)
DNA (1755bp) protein (585aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Putative 1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0U7_9CLOT
L3_114_000G1_scaffold_282_5
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4424..5227)
DNA (804bp) protein (268aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0N6_9CLOT
LytTr DNA-binding domain protein {ECO:0000313|EMBL:CDE69825.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Response regulator of the LytR/AlgR family
L3_114_000G1_scaffold_282_6
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5487..5798)
DNA (312bp) protein (104aa)
Beta-xylosidase (1 4-beta-D-xylan xylohydrolase) (Xylan1 4-beta-xylosidase) n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1Q6_9CLOT
Beta-xylosidase (1 4-beta-D-xylan xylohydrolase) (Xylan1 4-beta-xylosidase) {ECO:0000313|EMBL:CDE69826.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
xylan 1,4-beta-xylosidase
L3_114_000G1_scaffold_282_7
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6551..8170)
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1Y8_9CLOT
L3_114_000G1_scaffold_282_8
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8243..8500)
DNA (258bp) protein (86aa)
Phosphocarrier protein PtsH n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0V2_9CLOT
Phosphocarrier protein PtsH {ECO:0000313|EMBL:CDE69829.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
phosphotransferase system, phosphocarrier protein HPr
L3_114_000G1_scaffold_282_9
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8621..9466)
DNA (846bp) protein (282aa)
Putative PRD domain protein EF_0829/AHA_3910 family n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0P2_9CLOT
Putative PRD domain protein EF_0829/AHA_3910 family {ECO:0000313|EMBL:CDE69830.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
transcriptional antiterminator, BglG family
L3_114_000G1_scaffold_282_10
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9489..11657)
DNA (2169bp) protein (723aa)
PTS system glucose-like IIB component n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1R0_9CLOT
PTS system glucose-like IIB component {ECO:0000313|EMBL:CDE69831.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
L3_114_000G1_scaffold_282_11
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11934..12584)
DNA (651bp) protein (217aa)
Transcriptional regulator TetR family n=1 Tax=Clostridium sp. CAG:277 RepID=R7K4A8_9CLOT
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDE69832.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
TetR family transcriptional regulator
L3_114_000G1_scaffold_282_12
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12628..13830)
DNA (1203bp) protein (401aa)
Putative RNA methylase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1Z2_9CLOT
Putative RNA methylase {ECO:0000313|EMBL:CDE69833.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
RNA methylase
L3_114_000G1_scaffold_282_13
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13830..15275)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0V6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69834.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_282_14
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15376..15759
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0P5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69835.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_282_15
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15815..16573)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1R5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69836.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_282_16
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16634..18160)
DNA (1527bp) protein (509aa)
Beta-xylosidase n=1 Tax=Roseburia sp. CAG:380 RepID=R6WLI0_9FIRM
Beta-xylosidase {ECO:0000313|EMBL:CDC94977.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Beta-xylosidase
L3_114_000G1_scaffold_282_17
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18315..19637)
DNA (1323bp) protein (441aa)
xylan 1,4-beta-xylosidase (EC:3.2.1.37)
Xylan 1 4-beta-xylosidase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0W0_9CLOT
Xylan 1 4-beta-xylosidase {ECO:0000313|EMBL:CDE69839.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_282_18
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19923..20798
DNA (876bp) protein (292aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0P8_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE69840.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
AraC family transcriptional regulator
L3_114_000G1_scaffold_282_19
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20870..21934)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1R8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69841.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
TrxB; thioredoxin reductase
L3_114_000G1_scaffold_282_20
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21970..22281)
DNA (312bp) protein (104aa)
Thioredoxin n=1 Tax=Clostridium sp. CAG:277 RepID=R7K4B8_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
thioredoxin
L3_114_000G1_scaffold_282_21
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22317..23636)
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K203_9CLOT
L3_114_000G1_scaffold_282_22
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23847..24338)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0W5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69844.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
HD domain.
L3_114_000G1_scaffold_282_23
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24570..28124)
DNA (3555bp) protein (1185aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VL67_9FIRM
L3_114_000G1_scaffold_282_24
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28308..28976)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0Q3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69845.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_282_25
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29034..30581)
DNA (1548bp) protein (516aa)
Putative gamma-D-glutamyl-L-diamino acid endopeptidase 1 n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1S2_9CLOT
Putative gamma-D-glutamyl-L-diamino acid endopeptidase 1 {ECO:0000313|EMBL:CDE69846.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Zinc carboxypeptidase.
L3_114_000G1_scaffold_282_26
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30785..31465)
DNA (681bp) protein (227aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K4C1_9CLOT
L3_114_000G1_scaffold_282_27
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31650..33407)
DNA (1758bp) protein (586aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Clostridium sp. CAG:277 RepID=R7K205_9CLOT
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDE69848.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
diguanylate cyclase (GGDEF) domain
L3_114_000G1_scaffold_282_28
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33445..34137)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0W8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69849.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_282_29
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34697..35164)
DNA (468bp) protein (156aa)
SsrA-binding protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0Q7_9CLOT
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
SmpB; tmRNA-binding protein
L3_114_000G1_scaffold_282_30
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35226..37580)
DNA (2355bp) protein (785aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1S6_9CLOT
Displaying items 1-30 of 71 in total

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