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L3_114_000G1_scaffold_315

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_315_1
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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320..1726
DNA (1407bp) protein (469aa)
aspB2; aspartate aminotransferase AspB (EC:2.6.1.1)
Aminotransferase class I and II n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0J4_9CLOT
Aminotransferase class I and II {ECO:0000313|EMBL:CDE69353.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_315_2
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1772..2836
DNA (1065bp) protein (355aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZI9_9CLOT
L3_114_000G1_scaffold_315_3
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2911..4263)
DNA (1353bp) protein (451aa)
Two-component sensor kinase n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZD5_9CLOT
Two-component sensor kinase {ECO:0000313|EMBL:CDE69355.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
two-component sensor kinase
L3_114_000G1_scaffold_315_4
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4260..4982)
DNA (723bp) protein (241aa)
Two component transcriptional regulator n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0D2_9CLOT
Two component transcriptional regulator {ECO:0000313|EMBL:CDE69356.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
two component transcriptional regulator
L3_114_000G1_scaffold_315_5
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5082..5381
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2Y0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69357.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_315_6
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5428..14154
DNA (8727bp) protein (2909aa)
Ig domain protein group 2 domain protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V970_9FIRM
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:CDC94808.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_114_000G1_scaffold_315_7
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14247..16235
DNA (1989bp) protein (663aa)
Peptidase S8/S53 family n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZE0_9CLOT
Peptidase S8/S53 family {ECO:0000313|EMBL:CDE69360.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
peptidase S8/S53 subtilisin kexin sedolisin
L3_114_000G1_scaffold_315_8
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16229..17626
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0D5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69361.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_315_9
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17613..18755
DNA (1143bp) protein (381aa)
ABC-type branched-chain amino acid transport system periplasmic component n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2Y3_9CLOT
ABC-type branched-chain amino acid transport system periplasmic component {ECO:0000313|EMBL:CDE69362.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_315_10
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18757..19671
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0K3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69363.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_315_11
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19683..21833
DNA (2151bp) protein (717aa)
NHLM bacteriocin system ABC transporter peptidase/ATP-binding protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZJ6_9CLOT
NHLM bacteriocin system ABC transporter peptidase/ATP-binding protein {ECO:0000313|EMBL:CDE69364.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein
L3_114_000G1_scaffold_315_12
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21849..23984
DNA (2136bp) protein (712aa)
ABC transporter transmembrane region n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZE4_9CLOT
ABC transporter transmembrane region {ECO:0000313|EMBL:CDE69365.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
NHLM bacteriocin system ABC transporter, ATP-binding protein
L3_114_000G1_scaffold_315_13
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24004..26961
DNA (2958bp) protein (986aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0D9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69366.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_315_14
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27152..27478
DNA (327bp) protein (109aa)
30S ribosomal protein S6 n=2 Tax=Clostridiales RepID=R6VC22_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
SSU ribosomal protein S6P
L3_114_000G1_scaffold_315_15
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27501..27956
DNA (456bp) protein (152aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0K6_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_315_16
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27994..28260
DNA (267bp) protein (89aa)
30S ribosomal protein S18 n=2 Tax=Clostridiales RepID=R6WCC0_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
rpsR; 30S ribosomal protein S18
L3_114_000G1_scaffold_315_17
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28550..29404
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZE8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69370.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_315_18
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29542..30369
DNA (828bp) protein (276aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
panB; putative 3-methyl-2-oxobutanoate hydroxymethyltransferas (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0E3_9CLOT
L3_114_000G1_scaffold_315_19
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30395..31234
DNA (840bp) protein (280aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; Pantothenate synthetase; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Pantothenate synthetase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2Y9_9CLOT
panC; pantoate--beta-alanine ligase
L3_114_000G1_scaffold_315_20
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31346..31729
DNA (384bp) protein (128aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0L2_9CLOT
L3_114_000G1_scaffold_315_21
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31773..32969
DNA (1197bp) protein (399aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZK4_9CLOT
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:CDE69374.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_315_22
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33032..33790)
DNA (759bp) protein (253aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
tRNA pseudouridine synthase A n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZF3_9CLOT
tRNA pseudouridine synthase A
L3_114_000G1_scaffold_315_23
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34064..35281
DNA (1218bp) protein (406aa)
NADPH-dependent butanol dehydrogenase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0E6_9CLOT
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:CDE69376.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Alcohol dehydrogenase, class IV
L3_114_000G1_scaffold_315_24
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35444..35614
DNA (171bp) protein (57aa)
Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2Z3_9CLOT
Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits {ECO:0000313|EMBL:CDE69377.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
L3_114_000G1_scaffold_315_25
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35756..35962
DNA (207bp) protein (69aa)
Hydroxylamine reductase n=2 Tax=Clostridiales RepID=R6WR81_9FIRM
Hydroxylamine reductase {ECO:0000313|EMBL:CDC96602.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Domain of unknown function (DUF1858).
L3_114_000G1_scaffold_315_26
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36100..36933)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69379.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
negative regulator of genetic competence sporulation and motility-like protein
L3_114_000G1_scaffold_315_27
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37448..37681
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69380.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_315_28
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37962..39683
DNA (1722bp) protein (574aa)
Predicted glycosyl hydrolase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0F0_9CLOT
Predicted glycosyl hydrolase {ECO:0000313|EMBL:CDE69381.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Predicted glycosyl hydrolase
L3_114_000G1_scaffold_315_29
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39747..40451
DNA (705bp) protein (235aa)
Cell wall hydrolase/autolysin n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2Z5_9CLOT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:CDE69382.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
cell wall hydrolase/autolysin
L3_114_000G1_scaffold_315_30
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40453..41508
DNA (1056bp) protein (352aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0M1_9CLOT
Sua5/YciO/YrdC/YwlC family protein
Displaying items 1-30 of 56 in total

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