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L3_114_000G1_scaffold_1235

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000G1_scaffold_1235_1
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(315..914)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K167_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69646.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_1235_2
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1269..2234)
DNA (966bp) protein (322aa)
scrK; 6-phosphofructokinase (ATP) (EC:2.7.1.4)
Kinase PfkB family n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3Q4_9CLOT
Kinase PfkB family {ECO:0000313|EMBL:CDE69647.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_1235_3
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2197..3666)
DNA (1470bp) protein (490aa)
sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1E4_9CLOT
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:CDE69648.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_1235_4
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3752..5662)
DNA (1911bp) protein (637aa)
PTS system glucose subfamily IIA component n=1 Tax=Clostridium sp. CAG:277 RepID=R7K097_9CLOT
PTS system glucose subfamily IIA component {ECO:0000313|EMBL:CDE69649.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
PTS system sucrose-specific IIA component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIB component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIC component, Glc family (TC 4.A.1.2.12)
L3_114_000G1_scaffold_1235_5
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5916..6890)
DNA (975bp) protein (325aa)
Transcriptional regulator LacI family n=1 Tax=Clostridium sp. CAG:277 RepID=R7K048_9CLOT
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDE69650.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
LacI family transcriptional regulator
L3_114_000G1_scaffold_1235_6
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6976..7614)
DNA (639bp) protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium sp. CAG:277 RepID=R7K172_9CLOT
L3_114_000G1_scaffold_1235_7
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7753..8364)
DNA (612bp) protein (204aa)
Putative cytidylate kinase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3Q9_9CLOT
Putative cytidylate kinase {ECO:0000313|EMBL:CDE69652.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
cytidylate kinase
L3_114_000G1_scaffold_1235_8
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8442..8873)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1E9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69653.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_1235_9
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8870..10414)
DNA (1545bp) protein (515aa)
ImpB/MucB/SamB family protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0A2_9CLOT
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:CDE69654.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L3_114_000G1_scaffold_1235_10
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10451..12493)
DNA (2043bp) protein (681aa)
Efflux ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K053_9CLOT
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDE69655.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_1235_11
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12483..13250)
DNA (768bp) protein (256aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Clostridium sp. CAG:277 RepID=R7K178_9CLOT
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDE69656.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
ABC transporter-like protein
L3_114_000G1_scaffold_1235_12
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13326..14327)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3R7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69657.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_1235_13
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14355..15020)
DNA (666bp) protein (222aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1F6_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CDE69658.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_114_000G1_scaffold_1235_14
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15068..15718)
DNA (651bp) protein (217aa)
C_GCAxxG_C_C family protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0A9_9CLOT
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:CDE69659.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_1235_15
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15771..16622)
DNA (852bp) protein (284aa)
Conserved repeat domain n=1 Tax=Clostridium sp. CAG:277 RepID=R7K059_9CLOT
Conserved repeat domain {ECO:0000313|EMBL:CDE69660.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
conserved repeat domain
L3_114_000G1_scaffold_1235_16
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16738..18444)
DNA (1707bp) protein (569aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K182_9CLOT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDE69661.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Methyl-accepting chemotaxis protein
L3_114_000G1_scaffold_1235_17
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18485..19666)
DNA (1182bp) protein (394aa)
Nucleoside-binding protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3S2_9CLOT
Nucleoside-binding protein {ECO:0000313|EMBL:CDE69662.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
nucleoside-binding protein
L3_114_000G1_scaffold_1235_18
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19842..20831)
DNA (990bp) protein (330aa)
RelA/SpoT domain protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1G0_9CLOT
RelA/SpoT domain protein {ECO:0000313|EMBL:CDE69663.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Guanosine polyphosphate pyrophosphohydrolases/synthetases
L3_114_000G1_scaffold_1235_19
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20892..22127)
DNA (1236bp) protein (412aa)
NADH-dependent butanol dehydrogenase A n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0B5_9CLOT
NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:CDE69664.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L3_114_000G1_scaffold_1235_20
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22202..23065)
DNA (864bp) protein (288aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
NTP pyrophosphohydrolases containing a Zn-finger probably nucleic-acid-binding n=1 Tax=Clostridium sp. CAG:277 RepID=R7K064_9CLOT
NTP pyrophosphohydrolases containing a Zn-finger probably nucleic-acid-binding {ECO:0000313|EMBL:CDE69665.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_1235_21
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23226..24503)
DNA (1278bp) protein (426aa)
Citrate transporter n=1 Tax=Clostridium sp. CAG:277 RepID=R7K187_9CLOT
Citrate transporter {ECO:0000313|EMBL:CDE69666.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
transporter, YbiR family
L3_114_000G1_scaffold_1235_22
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24845..25078
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69667.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_1235_23
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25155..26237
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K288_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70349.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Putative transposase, YhgA-like.
L3_114_000G1_scaffold_1235_24
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26370..27557)
DNA (1188bp) protein (396aa)
Bacterial flagellin domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRW2_9FIRM
Bacterial flagellin domain protein {ECO:0000313|EMBL:EEG94630.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_114_000G1_scaffold_1235_25
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27627..27881)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K194_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69671.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_1235_26
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28043..28612
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3T4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69672.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_1235_27
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28933..29532)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1H0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69673.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_000G1_scaffold_1235_28
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29773..30279)
DNA (507bp) protein (169aa)
Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0C5_9CLOT
Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family {ECO:0000313|EMBL:CDE69674.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_1235_29
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30450..31112
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K075_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69675.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_000G1_scaffold_1235_30
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31209..32177
DNA (969bp) protein (323aa)
Ribonuclease BN n=1 Tax=Clostridium sp. CAG:277 RepID=R7K199_9CLOT
Ribonuclease BN {ECO:0000313|EMBL:CDE69676.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Predicted membrane protein
Displaying items 1-30 of 36 in total

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