ggKbase home page

L3_114_000M1_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1_1
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2..1051
DNA (1050bp) protein (350aa)
Aspartate oxidase (EC:1.4.3.16)
FAD binding domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N4F0_9FIRM
L-aspartate oxidase {ECO:0000313|EMBL:CCZ33126.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_114_000M1_scaffold_1_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1017..1883
DNA (867bp) protein (289aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=3 Tax=Erysipelotrichaceae RepID=B0N4F1_9FIRM
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:EHQ44723.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_114_000M1_scaffold_1_3
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2021..3388
DNA (1368bp) protein (456aa)
FAD dependent oxidoreductase n=2 Tax=Erysipelotrichaceae RepID=B0N4F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44722.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
FAD dependent oxidoreductase
L3_114_000M1_scaffold_1_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3402..4025)
DNA (624bp) protein (208aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33123.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_114_000M1_scaffold_1_5
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4006..4656)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N4F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18556.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_114_000M1_scaffold_1_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4701..5045)
DNA (345bp) protein (115aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N4F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33121.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_114_000M1_scaffold_1_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5061..5429)
DNA (369bp) protein (123aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33120.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_114_000M1_scaffold_1_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5495..6520)
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=4 Tax=Erysipelotrichaceae RepID=B0N4F7_9FIRM
queA; tRNA ribosyltransferase-isomerase (Queuosine biosynthesis protein QueA)
L3_114_000M1_scaffold_1_9
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6522..7658)
DNA (1137bp) protein (379aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=5 Tax=Erysipelotrichaceae RepID=B0N4F8_9FIRM
L3_114_000M1_scaffold_1_10
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7752..8543)
DNA (792bp) protein (264aa)
Cof-like hydrolase n=4 Tax=Erysipelotrichaceae RepID=B0N4F9_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EHM89847.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Cof-like hydrolase
L3_114_000M1_scaffold_1_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8636..9340)
DNA (705bp) protein (235aa)
LytTr DNA-binding domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N4G0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33116.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Response regulator of the LytR/AlgR family
L3_114_000M1_scaffold_1_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9523..10089
DNA (567bp) protein (189aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RPR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33115.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Putative accessory gene regulator protein B
L3_114_000M1_scaffold_1_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10317..11165
DNA (849bp) protein (283aa)
Oxidoreductase NAD-binding domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N4G2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89850.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
2-polyprenylphenol hydroxylase
L3_114_000M1_scaffold_1_14
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11165..12553
DNA (1389bp) protein (463aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EDS18565.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EDS18565.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.4.1.13 1.97.-.- 1.4.1.14)
Glutamate synthase (NADPH), homotetrameric n=3 Tax=Erysipelotrichaceae RepID=B0N4G3_9FIRM
L3_114_000M1_scaffold_1_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12635..13966
DNA (1332bp) protein (444aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=G9R596_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33111.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_114_000M1_scaffold_1_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13985..14569
DNA (585bp) protein (195aa)
ribosyldihydronicotinamide dehydrogenase (EC:1.10.99.2)
Flavodoxin-like protein n=3 Tax=Erysipelotrichaceae RepID=B0N4G5_9FIRM
Flavodoxin-like protein {ECO:0000313|EMBL:CCZ33110.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_114_000M1_scaffold_1_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14574..15116
DNA (543bp) protein (181aa)
Acetyltransferase, GNAT family n=5 Tax=Erysipelotrichaceae RepID=B0N4G6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44707.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
N-acetyltransferase GCN5
L3_114_000M1_scaffold_1_18
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15222..16097
DNA (876bp) protein (292aa)
DNA-binding helix-turn-helix protein n=4 Tax=Erysipelotrichaceae RepID=B0N4G7_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS18569.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Predicted transcriptional regulators
L3_114_000M1_scaffold_1_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16208..17362
DNA (1155bp) protein (385aa)
DNA-binding helix-turn-helix protein n=7 Tax=Erysipelotrichaceae RepID=B0N4G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33107.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Predicted transcriptional regulators
L3_114_000M1_scaffold_1_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17528..18193
DNA (666bp) protein (222aa)
YheO-like protein n=5 Tax=Erysipelotrichaceae RepID=B0N4G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33106.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_114_000M1_scaffold_1_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18203..19843
DNA (1641bp) protein (547aa)
DHHA2 domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N4H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33105.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative manganase-dependent inorganic pyrophosphatase
L3_114_000M1_scaffold_1_22
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19845..20114
DNA (270bp) protein (90aa)
S4 domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N4H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44702.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
yabO; ribosome-associated heat shock protein
L3_114_000M1_scaffold_1_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20369..22060
DNA (1692bp) protein (564aa)
Glycosyl hydrolase family 20, catalytic domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N4H2_9FIRM
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:CCZ33101.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
beta-N-acetylhexosaminidase
L3_114_000M1_scaffold_1_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22251..26312
DNA (4062bp) protein (1354aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ARP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44700.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
glycoside hydrolase
L3_114_000M1_scaffold_1_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26421..28202
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R5A6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89862.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_114_000M1_scaffold_1_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28301..29668
DNA (1368bp) protein (456aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
apeA; M18 family aminopeptidase 1 (EC:3.4.11.-)
M18 family aminopeptidase n=2 Tax=Erysipelotrichaceae RepID=B0N4H5_9FIRM
L3_114_000M1_scaffold_1_27
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29851..31176
DNA (1326bp) protein (442aa)
MATE efflux family protein n=3 Tax=Erysipelotrichaceae RepID=B0N4H6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDS18578.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_114_000M1_scaffold_1_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

31259..31798
DNA (540bp) protein (180aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35067.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_114_000M1_scaffold_1_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

31848..32147
DNA (300bp) protein (100aa)
Sporulation protein YabP n=5 Tax=Erysipelotrichaceae RepID=B0N4H8_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:CCZ35066.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_114_000M1_scaffold_1_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

32147..32575
DNA (429bp) protein (143aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4H9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35065.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Displaying items 1-30 of 223 in total

View Taxonomy