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L3_114_000M1_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 165 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_4_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..124
DNA (123bp) protein (41aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1BC07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88704.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
phosphosugar isomerase
L3_114_000M1_scaffold_4_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

137..550
DNA (414bp) protein (138aa)
PTS system fructose IIA component n=6 Tax=Firmicutes RepID=E4LTB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88705.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system fructose subfamily transporter subunit IIA
L3_114_000M1_scaffold_4_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

714..1799
DNA (1086bp) protein (362aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LTC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88706.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
CdaR family transcriptional regulator
L3_114_000M1_scaffold_4_4
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1796..2263
DNA (468bp) protein (156aa)
PTS system sorbose subfamily IIB component n=6 Tax=Firmicutes RepID=E4LTC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88707.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system sorbose subfamily transporter subunit IIB
L3_114_000M1_scaffold_4_5
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2284..3072
DNA (789bp) protein (263aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|SAAS:SAAS00086366}; EC=4.-.-.- {ECO:0000256|SAAS:SAAS00278209};; EC=4.3.3.7 {ECO:0000256|SAAS:SAAS00086421};; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
Dihydrodipicolinate synthase n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VQ95_9FIRM
dihydrodipicolinate synthetase
L3_114_000M1_scaffold_4_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3139..3621
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LW07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37047.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_4_7
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3647..4297
DNA (651bp) protein (217aa)
4-hydroxy-2-oxoglutarate aldolase (EC:4.1.3.16)
KDPG and KHG aldolase n=3 Tax=Firmicutes RepID=E4LW06_9CLOT
KDPG and KHG aldolase {ECO:0000313|EMBL:EFR36967.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_4_8
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4466..6541
DNA (2076bp) protein (692aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Clostridium sp. HGF2 RepID=E4LW05_9CLOT
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EFR37072.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
transcription antiterminator
L3_114_000M1_scaffold_4_9
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6705..7583)
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VV69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72402.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
adenylyltransferase
L3_114_000M1_scaffold_4_10
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7906..8370
DNA (465bp) protein (155aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21)
S-ribosylhomocysteinase LuxS n=3 Tax=Firmicutes RepID=E4LW03_9CLOT
L3_114_000M1_scaffold_4_11
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8427..9776
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LW02_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EFR37142.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
MATE efflux family protein
L3_114_000M1_scaffold_4_12
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9885..10337
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LW01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37187.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_114_000M1_scaffold_4_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10607..11899
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LW00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37112.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_114_000M1_scaffold_4_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12355..12912)
DNA (558bp) protein (186aa)
Chromate transport protein n=2 Tax=Firmicutes RepID=E4LVZ9_9CLOT
Chromate transport protein {ECO:0000313|EMBL:EFR37143.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
chromate transporter
L3_114_000M1_scaffold_4_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12909..13457)
DNA (549bp) protein (183aa)
Chromate transport protein n=4 Tax=Firmicutes RepID=E4LVZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88293.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Chromate transporter
L3_114_000M1_scaffold_4_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13601..15202
DNA (1602bp) protein (534aa)
Putative gamma-glutamyltransferase n=2 Tax=Firmicutes RepID=E4LVZ7_9CLOT
Putative gamma-glutamyltransferase {ECO:0000313|EMBL:EFR36949.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
gamma-glutamyltransferase
L3_114_000M1_scaffold_4_17
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15234..15932
DNA (699bp) protein (233aa)
LytTr DNA-binding domain protein n=4 Tax=Firmicutes RepID=E4LVZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85348.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
two-component system response regulator
L3_114_000M1_scaffold_4_18
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16712..18091
DNA (1380bp) protein (460aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=G1VV60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88290.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_114_000M1_scaffold_4_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18238..18795
DNA (558bp) protein (186aa)
agrB1; accessory gene regulator protein B (EC:3.4.-.-)
Accessory protein regulator protein B n=4 Tax=Firmicutes RepID=E4LVZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88289.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_114_000M1_scaffold_4_20
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19101..21971
DNA (2871bp) protein (957aa)
Sigma-54 interaction domain protein n=2 Tax=Firmicutes RepID=E4LVZ3_9CLOT
Transcriptional regulatory protein LevR family protein {ECO:0000313|EMBL:CDC85345.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system transcriptional activator
L3_114_000M1_scaffold_4_21
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22031..22516
DNA (486bp) protein (162aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=2 Tax=Firmicutes RepID=E4LVZ2_9CLOT
Phosphoenolpyruvate-dependent sugar PTS family porter EIIA 2 {ECO:0000313|EMBL:CDC85344.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type)
L3_114_000M1_scaffold_4_22
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22506..22805
DNA (300bp) protein (100aa)
PTS system, sorbitol-specific IIB component n=7 Tax=Firmicutes RepID=E4LVZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88286.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_114_000M1_scaffold_4_23
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22829..24103
DNA (1275bp) protein (425aa)
PTS system Galactitol-specific IIC component n=2 Tax=Firmicutes RepID=E4LVZ0_9CLOT
PTS system Galactitol-specific IIC component {ECO:0000313|EMBL:CDC85342.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system Galactitol-specific IIC component
L3_114_000M1_scaffold_4_24
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24087..25193
DNA (1107bp) protein (369aa)
L-iditol 2-dehydrogenase {ECO:0000313|EMBL:EFR37057.1}; EC=1.1.1.14 {ECO:0000313|EMBL:EFR37057.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L-iditol 2-dehydrogenase n=2 Tax=Firmicutes RepID=E4LVY9_9CLOT
alcohol dehydrogenase GroES domain-containing protein
L3_114_000M1_scaffold_4_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25421..26197
DNA (777bp) protein (259aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase (GPI) n=4 Tax=Firmicutes RepID=E4LVY8_9CLOT
Glucose-6-phosphate isomerase (GPI) {ECO:0000313|EMBL:EFR37186.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_4_26
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26176..27300
DNA (1125bp) protein (375aa)
Mannitol dehydrogenase domain protein n=2 Tax=Firmicutes RepID=E4LVY7_9CLOT
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:EFR37149.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Mannitol dehydrogenase C-domain subfamily
L3_114_000M1_scaffold_4_27
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27583..27948)
DNA (366bp) protein (122aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LVY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85338.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000M1_scaffold_4_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27945..28937)
DNA (993bp) protein (331aa)
Oxidoreductase, NAD-binding domain protein n=4 Tax=Firmicutes RepID=E4LVY5_9CLOT
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:EQJ51647.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000M1_scaffold_4_29
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29098..29856
DNA (759bp) protein (253aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LVY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85336.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_114_000M1_scaffold_4_30
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29859..30248
DNA (390bp) protein (130aa)
Mutator mutT protein {ECO:0000313|EMBL:EFR37218.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFR37218.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Mutator mutT protein n=3 Tax=Firmicutes RepID=E4LVY3_9CLOT
ADP-ribose pyrophosphatase
Displaying items 1-30 of 165 in total

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