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L3_114_000M1_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_8_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3..1331)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RRG7_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA {ECO:0000313|EMBL:EDS19112.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
FAD dependent oxidoreductase family protein
L3_114_000M1_scaffold_8_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1630..2454
DNA (825bp) protein (275aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
thiM; hydroxyethylthiazole kinase ThiM (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R363_9FIRM
L3_114_000M1_scaffold_8_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2459..3079
DNA (621bp) protein (207aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Coprobacillus sp. D7 RepID=C3RJD3_9FIRM
L3_114_000M1_scaffold_8_4
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3072..3710
DNA (639bp) protein (213aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N2F3_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EDS19913.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
haloacid dehalogenase superfamily protein
L3_114_000M1_scaffold_8_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3713..4507
DNA (795bp) protein (265aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=5 Tax=Erysipelotrichaceae RepID=B0N2F2_9FIRM
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CCZ34577.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_114_000M1_scaffold_8_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4583..8029
DNA (3447bp) protein (1149aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=3 Tax=Coprobacillus RepID=G9R367_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CCZ34578.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain
L3_114_000M1_scaffold_8_7
unknown

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comp(7983..8105)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_114_000M1_scaffold_8_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8157..9596
DNA (1440bp) protein (480aa)
Amino acid carrier protein n=2 Tax=Erysipelotrichaceae RepID=B0N2E9_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:CCZ34579.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
amino acid carrier protein
L3_114_000M1_scaffold_8_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9610..9882)
DNA (273bp) protein (91aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N2E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34580.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_114_000M1_scaffold_8_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10137..10511
DNA (375bp) protein (125aa)
TspO/MBR family protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N2E7_9FIRM
TspO/MBR family protein {ECO:0000313|EMBL:EDS19907.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
TspO and MBR-like protein
L3_114_000M1_scaffold_8_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10562..10996)
DNA (435bp) protein (145aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N2E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33850.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_114_000M1_scaffold_8_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11060..12010)
DNA (951bp) protein (317aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RJC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33849.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_114_000M1_scaffold_8_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12329..13114
DNA (786bp) protein (262aa)
SIS domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N2E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33848.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
phosphosugar-binding transcriptional regulator
L3_114_000M1_scaffold_8_14
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13141..13914)
DNA (774bp) protein (258aa)
Transcriptional regulator, RpiR family n=4 Tax=Erysipelotrichaceae RepID=B0N2E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90927.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
transcriptional regulator, RpiR family
L3_114_000M1_scaffold_8_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13934..14485)
DNA (552bp) protein (184aa)
DJ-1 family protein n=3 Tax=Erysipelotrichaceae RepID=B0N2E2_9FIRM
DJ-1 family protein {ECO:0000313|EMBL:CCZ33846.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
DJ-1 family protein
L3_114_000M1_scaffold_8_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14487..15047)
DNA (561bp) protein (187aa)
DJ-1 family protein n=4 Tax=Erysipelotrichaceae RepID=B0N2E1_9FIRM
DJ-1 family protein {ECO:0000313|EMBL:EHQ45416.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
DJ-1 family protein
L3_114_000M1_scaffold_8_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15182..15904)
DNA (723bp) protein (241aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N2E0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33844.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_114_000M1_scaffold_8_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15894..17087)
DNA (1194bp) protein (398aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
diphosphate--fructose-6-phosphate 1-phosphotransferase (EC:2.7.1.90)
Phosphofructokinase n=2 Tax=Erysipelotrichaceae RepID=B0N2D9_9FIRM
L3_114_000M1_scaffold_8_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17110..18531)
DNA (1422bp) protein (474aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9R378_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45413.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_114_000M1_scaffold_8_20
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18534..19457)
DNA (924bp) protein (308aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase, pyridine binding domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N2D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90933.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_114_000M1_scaffold_8_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19459..20259)
DNA (801bp) protein (267aa)
putative transketolase N-terminal section (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1APA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45411.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_114_000M1_scaffold_8_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20311..21021)
DNA (711bp) protein (237aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=5 Tax=Erysipelotrichaceae RepID=B0N2D5_9FIRM
L3_114_000M1_scaffold_8_23
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21195..21965)
DNA (771bp) protein (257aa)
Transcriptional regulator, DeoR family n=4 Tax=Erysipelotrichaceae RepID=B0N2D4_9FIRM
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EDS19894.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Transcriptional regulators of sugar metabolism
L3_114_000M1_scaffold_8_24
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(22326..22556)
DNA (231bp) protein (77aa)
30S ribosomal protein S18 n=5 Tax=Erysipelotrichaceae RepID=B0N2D3_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
SSU ribosomal protein S18P
L3_114_000M1_scaffold_8_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22574..23056)
DNA (483bp) protein (161aa)
Single-stranded DNA-binding protein n=5 Tax=Erysipelotrichaceae RepID=B0N2D2_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
single-stranded DNA-binding protein
L3_114_000M1_scaffold_8_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(23072..23353)
DNA (282bp) protein (94aa)
30S ribosomal protein S6 n=5 Tax=Erysipelotrichaceae RepID=B0N2D1_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
rpsF; 30S ribosomal protein S6
L3_114_000M1_scaffold_8_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23488..24873)
DNA (1386bp) protein (462aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative glycosidase (EC:3.2.1.-)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RJA9_9FIRM
L3_114_000M1_scaffold_8_28
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24874..25509)
DNA (636bp) protein (212aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=4 Tax=Erysipelotrichaceae RepID=B0N2C9_9FIRM
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_114_000M1_scaffold_8_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25678..26583
DNA (906bp) protein (302aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=C3RJA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33826.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Na/Pi-cotransporter
L3_114_000M1_scaffold_8_30
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26555..27133
DNA (579bp) protein (193aa)
alkaline phosphatase (EC:3.1.3.1)
SNARE-like domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N2C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90943.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Displaying items 1-30 of 151 in total

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