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L3_114_000M1_scaffold_9

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Displaying items 1-30 of 144 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_9_1
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(189..695)
DNA (507bp) protein (169aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Clostridium sp. HGF2 RepID=E4LTF2_9CLOT
L3_114_000M1_scaffold_9_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(860..1774)
DNA (915bp) protein (305aa)
Kinase, PfkB family n=5 Tax=Firmicutes RepID=E4LTF3_9CLOT
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:EQJ56681.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Sugar kinases, ribokinase family
L3_114_000M1_scaffold_9_3
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1963..3765)
DNA (1803bp) protein (601aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EFR37764.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFR37764.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=2 Tax=Firmicutes RepID=E4LTF4_9CLOT
L3_114_000M1_scaffold_9_4
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3828..4541)
DNA (714bp) protein (238aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LTF5_9CLOT
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EFR37872.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
GntR family transcriptional regulator
L3_114_000M1_scaffold_9_5
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4689..5507)
DNA (819bp) protein (273aa)
PTS system mannose/fructose/sorbose family IID component n=7 Tax=Firmicutes RepID=E4LTF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88985.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_114_000M1_scaffold_9_6
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5522..6274)
DNA (753bp) protein (251aa)
PTS system sorbose-specific iic component n=3 Tax=Firmicutes RepID=E4LTF7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX75115.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
PTS sugar transporter
L3_114_000M1_scaffold_9_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6293..6769)
DNA (477bp) protein (159aa)
PTS system sorbose subfamily IIB component n=5 Tax=Firmicutes RepID=E4LTF8_9CLOT
PTS system sorbose subIIB component family protein {ECO:0000313|EMBL:EQJ56686.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system sorbose subfamily transporter subunit IIB
L3_114_000M1_scaffold_9_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6793..7188)
DNA (396bp) protein (132aa)
pts system mannose-specific eiiab component (eiiab-man) (EC:2.7.1.69 2.7.1.-)
PTS system fructose IIA component n=5 Tax=Firmicutes RepID=E4LTF9_9CLOT
PTS system fructose IIA component family protein {ECO:0000313|EMBL:EQJ56687.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000M1_scaffold_9_9
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7208..8371)
DNA (1164bp) protein (388aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EFR37928.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFR37928.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Aminotransferase, class I/II n=1 Tax=Clostridium sp. HGF2 RepID=E4LTG0_9CLOT
class I and II aminotransferase
L3_114_000M1_scaffold_9_10
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8385..9092)
DNA (708bp) protein (236aa)
N-acylglucosamine-6-phosphate 2-epimerase {ECO:0000256|SAAS:SAAS00074327}; EC=5.1.3.9 {ECO:0000256|SAAS:SAAS00074327};; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VR13_9FIRM
L3_114_000M1_scaffold_9_11
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9089..9826)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LTG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37750.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_114_000M1_scaffold_9_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9876..10373)
DNA (498bp) protein (166aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LTG3_9CLOT
YcxB-like family protein {ECO:0000313|EMBL:EQJ56691.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000M1_scaffold_9_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10706..11521)
DNA (816bp) protein (272aa)
SIS domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LTG5_9CLOT
SIS domain protein {ECO:0000313|EMBL:EFR37914.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
RpiR family transcriptional regulator
L3_114_000M1_scaffold_9_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11619..12857)
DNA (1239bp) protein (413aa)
Bifunctional protein FolC {ECO:0000313|EMBL:EFR37833.1}; EC=6.3.2.17 {ECO:0000313|EMBL:EFR37833.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Bifunctional protein FolC n=1 Tax=Clostridium sp. HGF2 RepID=E4LTG6_9CLOT
folylpolyglutamate synthase
L3_114_000M1_scaffold_9_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12854..13513)
DNA (660bp) protein (220aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ung-1; uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=5 Tax=Firmicutes RepID=E4LTG7_9CLOT
L3_114_000M1_scaffold_9_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14177..14725)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LTG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37846.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Uncharacterized MobA-related protein
L3_114_000M1_scaffold_9_17
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14715..16991)
DNA (2277bp) protein (759aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LTH0_9CLOT
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein {ECO:0000313|EMBL:EFR37819.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_9_18
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16988..17449)
DNA (462bp) protein (154aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs (EC:1.2.99.2)
2Fe-2S iron-sulfur cluster-binding domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LTH1_9CLOT
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:EFR37917.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_9_19
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17446..18219)
DNA (774bp) protein (258aa)
FAD binding domain in molybdopterin dehydrogenase n=5 Tax=Firmicutes RepID=E4LTH2_9CLOT
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:EFR37782.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
L3_114_000M1_scaffold_9_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18176..18994)
DNA (819bp) protein (273aa)
ABC transporter, ATP-binding protein n=4 Tax=Firmicutes RepID=E4LTH3_9CLOT
ABC transporter family protein {ECO:0000313|EMBL:EQJ56702.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative iron ABC transporter ATP-binding protein
L3_114_000M1_scaffold_9_21
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18991..19959)
DNA (969bp) protein (323aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=2 Tax=Clostridiales RepID=E4LTH4_9CLOT
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EFR37775.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
iron chelate update ABC transporter FeCT family, permease protein
L3_114_000M1_scaffold_9_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19961..20965)
DNA (1005bp) protein (335aa)
Periplasmic binding protein n=5 Tax=Firmicutes RepID=E4LTH5_9CLOT
Periplasmic binding family protein {ECO:0000313|EMBL:EQJ56704.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L3_114_000M1_scaffold_9_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20969..21472)
DNA (504bp) protein (168aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LTH6_9CLOT
NTPase family protein {ECO:0000313|EMBL:EQJ56705.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Predicted nucleotide kinase
L3_114_000M1_scaffold_9_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21474..22784)
DNA (1311bp) protein (437aa)
Xanthine permease n=4 Tax=Firmicutes RepID=H1AZF9_9FIRM
Xanthine permease family protein {ECO:0000313|EMBL:EQJ56706.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
uracil-xanthine permease
L3_114_000M1_scaffold_9_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23254..24771
DNA (1518bp) protein (506aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LTH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37866.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_114_000M1_scaffold_9_26
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24752..25414
DNA (663bp) protein (221aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LTH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY88963.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_114_000M1_scaffold_9_27
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25589..26653)
DNA (1065bp) protein (355aa)
Peptidase propeptide and YPEB domain protein n=5 Tax=Firmicutes RepID=E4LTI0_9CLOT
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:EFR37858.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Peptidase propeptide and YPEB domain.
L3_114_000M1_scaffold_9_28
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26727..28133)
DNA (1407bp) protein (469aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LTI1_9CLOT
Signal transduction histidine kinase
L3_114_000M1_scaffold_9_29
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28130..28804)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LTI2_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EFR37804.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_114_000M1_scaffold_9_30
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29060..29749)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LTI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37906.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Displaying items 1-30 of 144 in total

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