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L3_114_000M1_scaffold_37

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_37_1
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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436..1725
DNA (1290bp) protein (430aa)
FemAB family protein n=3 Tax=Firmicutes RepID=E4LQZ0_9CLOT
FemAB family protein {ECO:0000313|EMBL:EFR38757.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Uncharacterized protein involved in methicillin resistance
L3_114_000M1_scaffold_37_2
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1741..2961
DNA (1221bp) protein (407aa)
FemAB family protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LQY9_9CLOT
FemAB family protein {ECO:0000313|EMBL:EFR38697.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
femAB family protein
L3_114_000M1_scaffold_37_3
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2974..3426
DNA (453bp) protein (151aa)
Hydrolase, P-loop family n=5 Tax=Firmicutes RepID=E4LQY8_9CLOT
YjeE family ATPase {ECO:0000313|EMBL:EHO22682.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hydrolase
L3_114_000M1_scaffold_37_4
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3426..4031
DNA (606bp) protein (202aa)
Universal bacterial protein YeaZ n=1 Tax=Clostridium sp. HGF2 RepID=E4LQY7_9CLOT
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EFR38741.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L3_114_000M1_scaffold_37_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4028..4477
DNA (450bp) protein (150aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EQJ60884.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EQJ60884.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=5 Tax=Firmicutes RepID=E4LQY6_9CLOT
L3_114_000M1_scaffold_37_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4474..5505
DNA (1032bp) protein (344aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=5 Tax=Firmicutes RepID=E4LQY5_9CLOT
L3_114_000M1_scaffold_37_7
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5951..6937
DNA (987bp) protein (329aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LQY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38809.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_114_000M1_scaffold_37_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6937..7269
DNA (333bp) protein (111aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
mRNA interferase n=7 Tax=Firmicutes RepID=E4LQY2_9CLOT
growth inhibitor
L3_114_000M1_scaffold_37_9
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8218..9246
DNA (1029bp) protein (343aa)
Transposase, IS605 OrfB family n=3 Tax=Firmicutes RepID=E4LQY1_9CLOT
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EFR38661.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
transposase
L3_114_000M1_scaffold_37_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9429..9821)
DNA (393bp) protein (131aa)
Transcriptional regulator, Rrf2 family n=5 Tax=Firmicutes RepID=E4LQY0_9CLOT
Rrf2 family protein {ECO:0000313|EMBL:EQJ50735.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
transcriptional regulator, BadM/Rrf2 family
L3_114_000M1_scaffold_37_11
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9818..10231)
DNA (414bp) protein (138aa)
Transcriptional regulator, Rrf2 family n=3 Tax=Firmicutes RepID=E4LQX9_9CLOT
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:EFR38754.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
transcriptional regulator, BadM/Rrf2 family
L3_114_000M1_scaffold_37_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10505..11431
DNA (927bp) protein (309aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase A n=4 Tax=Firmicutes RepID=E4LQX8_9CLOT
L3_114_000M1_scaffold_37_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12410..12880
DNA (471bp) protein (157aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LQX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ50738.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000M1_scaffold_37_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12951..13586
DNA (636bp) protein (212aa)
HAD hydrolase, family IA, variant 1 n=3 Tax=Firmicutes RepID=E4LQX6_9CLOT
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:EFR38743.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
HAD family phosphatase
L3_114_000M1_scaffold_37_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13625..14398
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E4LQX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38691.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_37_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14456..14668)
DNA (213bp) protein (71aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LQX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38832.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon domain-containing protein
L3_114_000M1_scaffold_37_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14881..15294
DNA (414bp) protein (138aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LQX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ50742.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000M1_scaffold_37_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16094..18052
DNA (1959bp) protein (653aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=5 Tax=Firmicutes RepID=E4LQX2_9CLOT
PRD domain protein {ECO:0000313|EMBL:EQJ50745.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
L3_114_000M1_scaffold_37_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18068..18928
DNA (861bp) protein (287aa)
AP endonuclease, family 2 n=3 Tax=Firmicutes RepID=E4LQX1_9CLOT
Xylose isomerase-like TIM barrel family protein {ECO:0000313|EMBL:EQJ50746.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
D-tagatose 3-epimerase
L3_114_000M1_scaffold_37_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18961..19833
DNA (873bp) protein (291aa)
tagatose-bisphosphate aldolase (EC:4.1.2.40)
Ketose-bisphosphate aldolase n=5 Tax=Firmicutes RepID=E4LQX0_9CLOT
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EFR38769.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_37_21
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19855..20337
DNA (483bp) protein (161aa)
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) (EC:2.7.1.69)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=7 Tax=Firmicutes RepID=E4LQW9_9CLOT
PTS system, fructose subfamily, IIA component {ECO:0000313|EMBL:ENY87070.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_114_000M1_scaffold_37_22
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20346..20675
DNA (330bp) protein (110aa)
PTS system, fructose-specific, IIB component (EC:2.7.1.69)
PTS system, Fru family, IIB component n=7 Tax=Firmicutes RepID=E4LQW8_9CLOT
PTS system, Fru family, IIB component {ECO:0000313|EMBL:EHO22450.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_114_000M1_scaffold_37_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20713..21738
DNA (1026bp) protein (342aa)
Phosphotransferase system, EIIC n=5 Tax=Firmicutes RepID=E4LQW7_9CLOT
PTS system, Fru family, IIC component domain protein {ECO:0000313|EMBL:EQJ50750.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system, fructose subfamily, IIC component
L3_114_000M1_scaffold_37_24
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21755..22669
DNA (915bp) protein (305aa)
Cupin domain protein n=4 Tax=Firmicutes RepID=E4LQW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO22452.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Cupin domain.
L3_114_000M1_scaffold_37_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22799..23248
DNA (450bp) protein (150aa)
Sugar-phosphate isomerase, RpiB/LacA/LacB family protein {ECO:0000313|EMBL:EQJ50752.1}; EC=5.3.1.- {ECO:0000313|EMBL:EQJ50752.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ribose-5-phosphate isomerase (EC:5.3.1.6)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=5 Tax=Firmicutes RepID=E4LQW5_9CLOT
L3_114_000M1_scaffold_37_26
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23262..24272
DNA (1011bp) protein (337aa)
dihydroxyacetone kinase DhaK subunit (EC:2.7.1.121 2.7.1.-)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1B358_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC86460.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000M1_scaffold_37_27
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24272..24916
DNA (645bp) protein (215aa)
glycerone kinase (EC:2.7.1.29)
Dihydroxyacetone kinase, L subunit n=5 Tax=Firmicutes RepID=E4LQW3_9CLOT
Dihydroxyacetone kinase L subunit {ECO:0000313|EMBL:CDC86459.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000M1_scaffold_37_28
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25217..25693
DNA (477bp) protein (159aa)
Cupin domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LQW1_9CLOT
Cupin domain protein {ECO:0000313|EMBL:EFR38727.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
cupin
L3_114_000M1_scaffold_37_29
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25819..26316
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E4LQW0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38731.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Predicted methylated DNA-protein cysteine methyltransferase
L3_114_000M1_scaffold_37_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26847..27104
DNA (258bp) protein (86aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Firmicutes RepID=E4LQV8_9CLOT
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EQJ50759.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system, cellobiose-specific IIB component
Displaying items 1-30 of 100 in total

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