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L3_114_000M1_scaffold_55

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Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_55_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(414..1196)
DNA (783bp) protein (261aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N144_9FIRM
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDS19525.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_114_000M1_scaffold_55_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1360..1887)
DNA (528bp) protein (176aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
nrdG3; anaerobic ribonucleoside triphosphate reductase activating protein NrdG3 (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=3 Tax=Erysipelotrichaceae RepID=B0N1A6_9FIRM
L3_114_000M1_scaffold_55_3
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1890..4049)
DNA (2160bp) protein (720aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EDS19527.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EDS19527.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N1A7_9FIRM
L3_114_000M1_scaffold_55_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4392..6509
DNA (2118bp) protein (706aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Erysipelotrichaceae RepID=B0N1A8_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CCZ35636.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_114_000M1_scaffold_55_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6509..7003
DNA (495bp) protein (165aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.97.1.4 1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=5 Tax=Erysipelotrichaceae RepID=B0N1A9_9FIRM
L3_114_000M1_scaffold_55_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7027..7686)
DNA (660bp) protein (220aa)
Cyclic nucleotide-binding domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N1B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35638.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
cyclic nucleotide-binding protein
L3_114_000M1_scaffold_55_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7768..8187
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AN74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45722.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_55_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8184..8642
DNA (459bp) protein (153aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N146_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94138.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_114_000M1_scaffold_55_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8941..10272)
DNA (1332bp) protein (444aa)
MATE efflux family protein n=2 Tax=Coprobacillus RepID=G9QWP9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHQ45724.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_55_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10474..11154
DNA (681bp) protein (227aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RGZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35642.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_114_000M1_scaffold_55_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11164..12021)
DNA (858bp) protein (286aa)
Transcriptional regulator, RpiR family n=2 Tax=Erysipelotrichaceae RepID=B0N149_9FIRM
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCZ35643.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
RpiR family transcriptional regulator
L3_114_000M1_scaffold_55_12
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12546..12728)
DNA (183bp) protein (61aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N150_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45727.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_114_000M1_scaffold_55_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12831..13475)
DNA (645bp) protein (215aa)
Beta-glucosides PTS, EIIB (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N151_9FIRM
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EDS19537.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_114_000M1_scaffold_55_14
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13498..13800)
DNA (303bp) protein (101aa)
Phosphotransferase system cellobiose-specific component IIB (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Erysipelotrichaceae RepID=B0N152_9FIRM
PTS system, lactose/cellobiose family IIB component {ECO:0000313|EMBL:EHM94131.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_114_000M1_scaffold_55_15
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13812..14129)
DNA (318bp) protein (106aa)
celA3; cellobiose-specific phosphotransferase enzyme IIB component CelA (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=4 Tax=Erysipelotrichaceae RepID=B0N153_9FIRM
PTS system, lactose/cellobiose family IIB component {ECO:0000313|EMBL:EHM94130.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_114_000M1_scaffold_55_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14368..15213)
DNA (846bp) protein (282aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N154_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35655.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_114_000M1_scaffold_55_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15330..16274)
DNA (945bp) protein (315aa)
csbB; putative glycosyltransferase CsbB (EC:2.4.-.-)
Glycosyltransferase, group 2 family protein n=5 Tax=Erysipelotrichaceae RepID=B0N155_9FIRM
Glycosyl transferase {ECO:0000313|EMBL:CCZ35656.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_114_000M1_scaffold_55_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16261..16668)
DNA (408bp) protein (136aa)
GtrA-like protein n=4 Tax=Erysipelotrichaceae RepID=B0N156_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35657.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_114_000M1_scaffold_55_19
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16640..19081)
DNA (2442bp) protein (814aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N157_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19543.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_114_000M1_scaffold_55_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19222..19923
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N158_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35660.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
two component transcriptional regulator, winged helix family
L3_114_000M1_scaffold_55_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19916..21244
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Histidine kinase A domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N159_9FIRM
signal transduction histidine kinase
L3_114_000M1_scaffold_55_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21288..21800
DNA (513bp) protein (171aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
DUTP diphosphatase n=5 Tax=Erysipelotrichaceae RepID=B0N160_9FIRM
DUTP diphosphatase {ECO:0000313|EMBL:CCZ35665.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_114_000M1_scaffold_55_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21841..22077)
DNA (237bp) protein (79aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N161_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35666.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_114_000M1_scaffold_55_24
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22239..23768
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N162_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19548.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_114_000M1_scaffold_55_25
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23860..24285)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N163_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19549.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Signal transduction histidine kinase
L3_114_000M1_scaffold_55_26
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24348..24554)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N164_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19550.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_114_000M1_scaffold_55_27
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24698..25522)
DNA (825bp) protein (275aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N165_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94268.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_114_000M1_scaffold_55_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25524..26192)
DNA (669bp) protein (223aa)
ABC transporter, ATP-binding protein n=2 Tax=Erysipelotrichaceae RepID=B0N166_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS19552.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
ABC-type multidrug transport system
L3_114_000M1_scaffold_55_29
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26290..26982)
DNA (693bp) protein (231aa)
Response regulator receiver domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N167_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45743.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_114_000M1_scaffold_55_30
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27095..28873)
DNA (1779bp) protein (593aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=2 Tax=Erysipelotrichaceae RepID=B0N168_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45744.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Displaying items 1-30 of 82 in total

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