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L3_114_000M1_scaffold_64

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_64_1
unknown

Not on your lists

3..203
DNA (201bp) protein (67aa)

This feature has no annotations

L3_114_000M1_scaffold_64_2
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(298..570)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXR8_9FIRM
magnesium and cobalt transport protein CorA
Magnesium and cobalt transport protein CorA {ECO:0000313|EMBL:AKA70514.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L3_114_000M1_scaffold_64_3
unknown

Not on your lists

comp(536..673)
DNA (138bp) protein (46aa)

This feature has no annotations

L3_114_000M1_scaffold_64_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(813..1211)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CLD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY33932.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_64_5
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1284..1838)
DNA (555bp) protein (185aa)
Methyltransferase domain-containing protein n=1 Tax=Blautia sp. CAG:237 RepID=R6KYA3_9FIRM
Methyltransferase domain-containing protein {ECO:0000313|EMBL:CDB78465.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_114_000M1_scaffold_64_6
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1835..2101)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87248.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_114_000M1_scaffold_64_7
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2305..2940
DNA (636bp) protein (212aa)
Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase n=1 Tax=Blautia sp. CAG:237 RepID=R6L8I7_9FIRM
Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase {ECO:0000313|EMBL:CDB78466.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
SAM-dependent methyltransferase
L3_114_000M1_scaffold_64_8
unknown

Not on your lists

comp(2948..3061)
DNA (114bp) protein (38aa)

This feature has no annotations

L3_114_000M1_scaffold_64_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3108..3947)
DNA (840bp) protein (280aa)
EDD domain protein, DegV family n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CL31_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EDY34094.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
degV family protein
L3_114_000M1_scaffold_64_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4166..4675
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CL29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY34092.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
TetR family transcriptional regulator
L3_114_000M1_scaffold_64_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4744..4986
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CL28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY34091.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_64_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4986..5258
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CL27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY34090.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_64_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5337..5558)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CL26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY34089.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_64_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5917..6837)
DNA (921bp) protein (307aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=2 Tax=Ruminococcus lactaris RepID=B5CL25_9FIRM
L3_114_000M1_scaffold_64_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6815..8194)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CL24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY34087.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Predicted permease
L3_114_000M1_scaffold_64_16
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8378..8701)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CL23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22003.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Domain of Unknown Function (DUF1540).
L3_114_000M1_scaffold_64_17
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8772..9287)
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CL22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY34085.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Predicted metal-binding protein related to the C-terminal domain of SecA
L3_114_000M1_scaffold_64_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9469..9684
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CL21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY34084.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_64_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9688..9843)
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CL20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY34083.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L3_114_000M1_scaffold_64_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10033..11313)
DNA (1281bp) protein (427aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Ruminococcus lactaris RepID=B5CL19_9FIRM
L3_114_000M1_scaffold_64_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11536..11757
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C3P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD21998.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_114_000M1_scaffold_64_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11884..13551)
DNA (1668bp) protein (556aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine-tRNA ligase n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C4K5_9FIRM
L3_114_000M1_scaffold_64_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13608..14339)
DNA (732bp) protein (244aa)
Hydrolase, NUDIX family n=2 Tax=Ruminococcus lactaris RepID=B5CL16_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDY34079.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
ADP-ribose pyrophosphatase
L3_114_000M1_scaffold_64_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14320..14730)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CL15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY34078.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_64_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14942..15223)
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CL14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD21994.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Transposase domain (DUF772).
L3_114_000M1_scaffold_64_26
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15407..16120
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C3P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD21993.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ABC-type multidrug transport system, ATPase component
L3_114_000M1_scaffold_64_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16259..16861)
DNA (603bp) protein (201aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EDY34075.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EDY34075.1};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
4-phosphoerythronate dehydrogenase n=2 Tax=Ruminococcus lactaris RepID=B5CL12_9FIRM
Lactate dehydrogenase and related dehydrogenases
L3_114_000M1_scaffold_64_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16821..16940)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C5I1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD21991.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Lactate dehydrogenase and related dehydrogenases
L3_114_000M1_scaffold_64_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16973..18316)
DNA (1344bp) protein (448aa)
MATE efflux family protein n=2 Tax=Ruminococcus lactaris RepID=B5CL11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD21990.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
putative efflux protein, MATE family
L3_114_000M1_scaffold_64_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18535..18993
DNA (459bp) protein (153aa)
M protein trans-acting positive regulator (MGA) HTH domain protein n=2 Tax=Ruminococcus lactaris RepID=B5CL10_9FIRM
M protein trans-acting positive regulator (MGA) HTH domain protein {ECO:0000313|EMBL:EDY34073.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
transcriptional regulator, AsnC family
Displaying items 1-30 of 83 in total

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