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L3_114_000M1_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_101_1
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1191..1553
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XXI9_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29893.1}; Uncharacterized protein {ECO:0000313|EMBL:KFI64594.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
hypothetical protein
L3_114_000M1_scaffold_101_2
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1675..2844)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUQ0_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29892.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
hypothetical protein
L3_114_000M1_scaffold_101_3
unknown

Not on your lists

3218..3406
DNA (189bp) protein (63aa)

This feature has no annotations

L3_114_000M1_scaffold_101_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3827..4684)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUQ2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70105.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hydrolase
L3_114_000M1_scaffold_101_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4988..6373
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PCI3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR04330.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_114_000M1_scaffold_101_6
unknown

Not on your lists

6407..6496
DNA (90bp) protein (30aa)

This feature has no annotations

L3_114_000M1_scaffold_101_7
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6605..8611
DNA (2007bp) protein (669aa)
1 4-beta-N-acetylmuramidase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GEL0_9BIFI
1 4-beta-N-acetylmuramidase {ECO:0000313|EMBL:CDB22825.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
1,4-beta-N-acetylmuramidase
L3_114_000M1_scaffold_101_8
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8691..10289
DNA (1599bp) protein (533aa)
FAD dependent oxidoreductase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GNJ6_9BIFI
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDB22826.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L3_114_000M1_scaffold_101_9
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10366..12054
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H9B5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22827.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
putative membrane spanning protein
L3_114_000M1_scaffold_101_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12116..13192
DNA (1077bp) protein (359aa)
Proline symporter n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3K8_BIFAA
proline symporter
Proline symporter {ECO:0000313|EMBL:BAF40291.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_114_000M1_scaffold_101_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13319..14341
DNA (1023bp) protein (341aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUQ8_9BIFI
rmlB2; dTDP-glucose 4,6-dehydratase
L3_114_000M1_scaffold_101_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14421..15497
DNA (1077bp) protein (359aa)
dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase n=3 Tax=Bifidobacterium bifidum RepID=E3ENI0_BIFBS
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KEF29272.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase
L3_114_000M1_scaffold_101_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15442..15747
DNA (306bp) protein (102aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GKM6_9BIFI
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KEF29272.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis
L3_114_000M1_scaffold_101_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15879..16790
DNA (912bp) protein (304aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7M1_BIFAD
glucose-1-phosphate thymidylyltransferase
L3_114_000M1_scaffold_101_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16797..17714)
DNA (918bp) protein (306aa)
LicD phosphotransferase like protein n=2 Tax=Bifidobacterium longum RepID=S3EIZ8_BIFLN
phosphotransferase
Putative phosphotransferase {ECO:0000313|EMBL:BAJ67460.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_114_000M1_scaffold_101_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17714..18958)
DNA (1245bp) protein (415aa)
Teichoic acid export ATP-binding protein TagH n=2 Tax=Bifidobacterium longum RepID=S3DI58_BIFLN
polysaccharide ABC transporter ATP-binding protein
Putative polysaccharide ABC transporter ATP-binding component {ECO:0000313|EMBL:BAJ67459.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_114_000M1_scaffold_101_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18959..19786)
DNA (828bp) protein (276aa)
Rhamnose-containing polysacharide translocation permease n=2 Tax=Bifidobacterium longum RepID=S3E1V4_BIFLN
polysaccharide ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L3_114_000M1_scaffold_101_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19949..20875
DNA (927bp) protein (309aa)
Glucosyltransferase n=2 Tax=Bifidobacterium longum RepID=S3DKC7_BIFLN
glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:BAJ67457.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_114_000M1_scaffold_101_19
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20903..22066
DNA (1164bp) protein (388aa)
Putative glycosyltransferase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GM13_9BIFI
Putative glycosyltransferase {ECO:0000313|EMBL:CDB22301.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
glycosyltransferase
L3_114_000M1_scaffold_101_20
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22053..23036
DNA (984bp) protein (328aa)
Putative glycosyltransferase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GD58_9BIFI
Putative glycosyltransferase {ECO:0000313|EMBL:CDB22300.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Glycosyltransferase
L3_114_000M1_scaffold_101_21
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23069..24091)
DNA (1023bp) protein (341aa)
Putative glycosyltransferase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GL02_9BIFI
Putative glycosyltransferase {ECO:0000313|EMBL:CDB22299.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
glycosyltransferase
L3_114_000M1_scaffold_101_22
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24133..26742)
DNA (2610bp) protein (870aa)
Arylsulfatase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XSZ8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR02510.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
phosphoglycerol transferase
L3_114_000M1_scaffold_101_23
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27885..28937
DNA (1053bp) protein (351aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CJZ2_BIFBI
L3_114_000M1_scaffold_101_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29506..29814)
DNA (309bp) protein (103aa)
Addiction module toxin, RelE/StbE family n=2 Tax=Mobiluncus mulieris RepID=D0YRW4_9ACTO
Addiction module toxin RelE {ECO:0000313|EMBL:KEF29263.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L3_114_000M1_scaffold_101_25
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29829..30119)
DNA (291bp) protein (97aa)
RelB/DinJ family addiction module antitoxin n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KW15_9ACTN
RelB antitoxin {ECO:0000313|EMBL:KFI94959.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_114_000M1_scaffold_101_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30530..31003)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7A5_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN82688.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_114_000M1_scaffold_101_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31205..32263
DNA (1059bp) protein (353aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7A4_BIFAD
ribose operon repressor RbsR
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDN82687.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_114_000M1_scaffold_101_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32537..33493
DNA (957bp) protein (319aa)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7A2_BIFAD
putative nucleoside hydrolase protein
Nucleoside hydrolase {ECO:0000313|EMBL:KEF29259.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
L3_114_000M1_scaffold_101_29
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33573..35024
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NQA7_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF29258.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
tetracycline resistance protein
L3_114_000M1_scaffold_101_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35136..36113
DNA (978bp) protein (326aa)
Putative ribokinase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUS3_9BIFI
Putative ribokinase {ECO:0000313|EMBL:EEG70126.1}; Sugar kinase {ECO:0000313|EMBL:BAR04310.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
sugar kinase
Displaying items 1-30 of 115 in total

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