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L3_114_000M1_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_108_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..150)
DNA (150bp) protein (50aa)
UPF0109 protein FAEPRAA2165_02853 n=2 Tax=Faecalibacterium prausnitzii RepID=C7H956_9FIRM
UPF0109 protein HMPREF9436_02577 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
RNA-binding protein (KH domain)
L3_114_000M1_scaffold_108_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(167..409)
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H957_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
SSU ribosomal protein S16P
L3_114_000M1_scaffold_108_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(495..1850)
DNA (1356bp) protein (452aa)
Signal recognition particle protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H958_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
signal recognition particle subunit FFH/SRP54 (srp54)
L3_114_000M1_scaffold_108_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1882..2265)
DNA (384bp) protein (128aa)
Helix-turn-helix protein, YlxM/p13 family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H959_9FIRM
UPF0122 protein FAEPRAA2165_02857 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_114_000M1_scaffold_108_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2564..3475
DNA (912bp) protein (304aa)
Pyridoxal-phosphate dependent protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H961_9FIRM
Pyridoxal-phosphate dependent protein {ECO:0000313|EMBL:EEU95598.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
cysteine synthase A
L3_114_000M1_scaffold_108_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3495..4823
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H962_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEU95599.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
putative efflux protein, MATE family
L3_114_000M1_scaffold_108_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4855..5541)
DNA (687bp) protein (229aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
Putative endopeptidase Clp n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H963_9FIRM
Putative endopeptidase Clp {ECO:0000313|EMBL:EEU95600.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_114_000M1_scaffold_108_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5795..6436
DNA (642bp) protein (214aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H965_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
AT-rich DNA-binding protein
L3_114_000M1_scaffold_108_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6529..7137
DNA (609bp) protein (203aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H966_9FIRM
L3_114_000M1_scaffold_108_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7601..8095)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H976_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95613.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_114_000M1_scaffold_108_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8076..8756)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H977_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95614.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_114_000M1_scaffold_108_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8767..9345)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H978_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95615.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_114_000M1_scaffold_108_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9329..9970)
DNA (642bp) protein (214aa)
Sigma-70 region 2 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H979_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EEU95616.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
RNA polymerase sigma factor, sigma-70 family
L3_114_000M1_scaffold_108_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10120..11082
DNA (963bp) protein (321aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H980_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_114_000M1_scaffold_108_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11242..13338
DNA (2097bp) protein (699aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98165.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_114_000M1_scaffold_108_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13560..14756)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H981_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95618.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_114_000M1_scaffold_108_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14764..15006)
DNA (243bp) protein (81aa)
Acyl carrier protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H982_9FIRM
Acyl carrier protein {ECO:0000256|RuleBase:RU003545}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Acyl carrier protein
L3_114_000M1_scaffold_108_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15189..16661)
DNA (1473bp) protein (491aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.3)
AMP-binding enzyme n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H983_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:EEU95620.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_114_000M1_scaffold_108_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16690..18198)
DNA (1509bp) protein (503aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.3)
AMP-binding enzyme n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H984_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:EEU95621.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_114_000M1_scaffold_108_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18575..19735
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H986_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95623.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Fucose 4-O-acetylase and related acetyltransferases
L3_114_000M1_scaffold_108_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19796..20623
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H987_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95624.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_114_000M1_scaffold_108_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20646..22247
DNA (1602bp) protein (534aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEU95625.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEU95625.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H988_9FIRM
Glycosyltransferase
L3_114_000M1_scaffold_108_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22551..23576
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H989_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95626.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_114_000M1_scaffold_108_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23667..24119
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H990_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95627.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_114_000M1_scaffold_108_25
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24165..24449)
DNA (285bp) protein (95aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FX52_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDE19834.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
putative Xre family DNA-binding protein
L3_114_000M1_scaffold_108_26
unknown

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24570..25085
DNA (516bp) protein (172aa)

This feature has no annotations

L3_114_000M1_scaffold_108_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25715..27967
DNA (2253bp) protein (751aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EEU95630.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EEU95630.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
formate acetyltransferase 1 (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H993_9FIRM
L3_114_000M1_scaffold_108_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27954..28709
DNA (756bp) protein (252aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
pyruvate formate-lyase 1-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H994_9FIRM
L3_114_000M1_scaffold_108_29
unknown

Not on your lists

28858..29034
DNA (177bp) protein (59aa)

This feature has no annotations

L3_114_000M1_scaffold_108_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29124..30971)
DNA (1848bp) protein (616aa)
HD domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H995_9FIRM
HD domain protein {ECO:0000313|EMBL:EEU95632.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
HD-GYP domain
Displaying items 1-30 of 61 in total

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