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L3_114_000M1_scaffold_119

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_119_1
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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95..1315
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VSQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73986.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
integrase family protein
L3_114_000M1_scaffold_119_2
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1465..2706
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VSQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73987.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
integrase family protein
L3_114_000M1_scaffold_119_3
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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3128..3772
DNA (645bp) protein (215aa)
Transcriptional regulator TetR family n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EQW6_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDA92347.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
transcriptional regulator
L3_114_000M1_scaffold_119_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4268..4636
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8L6_9FIRM
O-Methyltransferase involved in polyketide biosynthesis
Uncharacterized protein {ECO:0000313|EMBL:EEV01819.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_114_000M1_scaffold_119_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4626..5015
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6B5Q9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08752.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_119_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5154..7529
DNA (2376bp) protein (792aa)
Phosphoketolase (EC:4.1.2.22)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Probable phosphoketolase n=4 Tax=Roseburia PF1_9FIRM">RepID=D4KPF1_9FIRM
L3_114_000M1_scaffold_119_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7549..8592)
DNA (1044bp) protein (348aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BB60_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CDA56371.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
AraC-type DNA-binding domain-containing proteins
L3_114_000M1_scaffold_119_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8779..10215
DNA (1437bp) protein (479aa)
Methyl-accepting chemotaxis protein n=3 Tax=Roseburia PF3_9FIRM">RepID=D4KPF3_9FIRM
Methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDA56370.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_119_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10320..11063
DNA (744bp) protein (248aa)
Response regulator receiver domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8M1_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEV01824.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Response regulator of the LytR/AlgR family
L3_114_000M1_scaffold_119_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11060..11722
DNA (663bp) protein (221aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=2 Tax=Roseburia intestinalis PF5_9FIRM">RepID=D4KPF5_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:CBL08757.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_119_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11925..13781
DNA (1857bp) protein (619aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L336_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL14026.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_119_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13756..15570
DNA (1815bp) protein (605aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L337_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL14027.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_119_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15716..19906
DNA (4191bp) protein (1397aa)
Lyzozyme M1 (1,4-beta-N-acetylmuramidase) n=2 Tax=Roseburia intestinalis RepID=D4L338_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EEV01829.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L3_114_000M1_scaffold_119_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19953..22307
DNA (2355bp) protein (785aa)
Listeria/Bacterioides repeat n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KPG0_9FIRM
Listeria/Bacterioides repeat
Listeria/Bacterioides repeat {ECO:0000313|EMBL:CBL08762.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_119_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22318..23316
DNA (999bp) protein (333aa)
tRNA-dihydrouridine synthase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8M8_9FIRM
Dihydrouridine synthase (Dus) {ECO:0000313|EMBL:EEV01831.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
tRNA-U20a,U20b-dihydrouridine synthase
L3_114_000M1_scaffold_119_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23416..24969
DNA (1554bp) protein (518aa)
Beta-xylosidase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KPG2_9FIRM
Beta-xylosidase
Beta-xylosidase {ECO:0000313|EMBL:CBL08764.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_119_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25082..26467
DNA (1386bp) protein (462aa)
Amino acid carrier protein n=2 Tax=Roseburia intestinalis RepID=D4L341_9FIRM
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:CBL14031.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_119_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26652..27614
DNA (963bp) protein (321aa)
Predicted beta-xylosidase (EC:3.2.1.55)
Predicted beta-xylosidase {ECO:0000313|EMBL:CBL14032.1}; EC=3.2.1.55 {ECO:0000313|EMBL:CBL14032.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Predicted beta-xylosidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L342_9FIRM
L3_114_000M1_scaffold_119_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27631..29136
DNA (1506bp) protein (502aa)
Alpha-L-arabinofuranosidase (EC:3.2.1.55)
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:CBL14033.1}; EC=3.2.1.55 {ECO:0000313|EMBL:CBL14033.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Alpha-L-arabinofuranosidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L343_9FIRM
L3_114_000M1_scaffold_119_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29226..29468
DNA (243bp) protein (81aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G8N4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA53854.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_119_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29509..30435)
DNA (927bp) protein (309aa)
Transcriptional regulator n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BKJ3_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDA53857.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_114_000M1_scaffold_119_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30467..30913)
DNA (447bp) protein (149aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Phosphoesterase, MJ0936 family n=3 Tax=Roseburia intestinalis RepID=D4L345_9FIRM
phosphoesterase, MJ0936 family
L3_114_000M1_scaffold_119_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31119..32051
DNA (933bp) protein (311aa)
Diguanylate cyclase (GGDEF) domain n=2 Tax=Roseburia intestinalis RepID=D4KPG8_9FIRM
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBL08770.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_119_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32442..34670
DNA (2229bp) protein (743aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EEV01842.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EEV01842.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
formate acetyltransferase 1 (EC:2.3.1.54)
Formate acetyltransferase 1 n=3 Tax=Roseburia intestinalis RepID=D4KPG9_9FIRM
L3_114_000M1_scaffold_119_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34687..35436
DNA (750bp) protein (250aa)
pyruvate formate-lyase 1-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Pyruvate formate-lyase 1-activating enzyme n=4 Tax=Roseburia RepID=D4KPH0_9FIRM
L3_114_000M1_scaffold_119_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35436..35576
DNA (141bp) protein (47aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G8P1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA53866.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_119_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35652..36182
DNA (531bp) protein (177aa)
SSU ribosomal protein S30P/sigma 54 modulation protein n=5 Tax=Bacteria RepID=D4KPH2_9FIRM
SSU ribosomal protein S30P/sigma 54 modulation protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:CDA53867.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_119_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36389..37237)
DNA (849bp) protein (283aa)
EDD domain protein, DegV family n=2 Tax=Bacteria RepID=D4KPH3_9FIRM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:CBL08775.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_119_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37421..37726
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7G8P4_9FIRM
Putative molybdopterin-guanine dinucleotide biosynthesis protein A {ECO:0000313|EMBL:CDA53871.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_114_000M1_scaffold_119_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37987..39042
DNA (1056bp) protein (352aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AP84_9FIRM
Displaying items 1-30 of 50 in total

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