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L3_114_000M1_scaffold_120

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_120_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(420..1337)
DNA (918bp) protein (306aa)
Beta-lactamase class C and other penicillin binding proteins n=4 Tax=root RepID=D4KND9_9FIRM
Beta-lactamase class C and other penicillin binding proteins
Beta-lactamase class C and other penicillin binding proteins {ECO:0000313|EMBL:CBL11209.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_120_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1444..2472)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJQ9_9FIRM
Protein of unknown function (DUF2961).
Uncharacterized protein {ECO:0000313|EMBL:CBK93856.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_114_000M1_scaffold_120_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2820..3164)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7GA94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54408.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_114_000M1_scaffold_120_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3161..3352)
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KND5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08387.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_120_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3506..3634)
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FWS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01269.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_114_000M1_scaffold_120_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3631..3936)
DNA (306bp) protein (102aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KV13_9FIRM
addiction module antitoxin, RelB/DinJ family
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:CBL11203.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_120_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3951..4673)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GA90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01267.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_114_000M1_scaffold_120_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4950..5942)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GA89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01266.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_114_000M1_scaffold_120_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5957..6511)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GA88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01265.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Transglutaminase-like superfamily.
L3_114_000M1_scaffold_120_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6508..6831)
DNA (324bp) protein (108aa)
Transglutaminase-like superfamily n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KND1_9FIRM
Transglutaminase-like superfamily.
Uncharacterized protein {ECO:0000313|EMBL:EEV01265.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_114_000M1_scaffold_120_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6865..7389)
DNA (525bp) protein (175aa)
Nitroreductase n=2 Tax=Roseburia intestinalis RepID=D4KND0_9FIRM
Nitroreductase
Nitroreductase family protein {ECO:0000313|EMBL:EEV01264.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_114_000M1_scaffold_120_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7443..8537)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GA86_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11198.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_120_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8598..9011)
DNA (414bp) protein (138aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Mutator mutT protein {ECO:0000313|EMBL:EEV01262.1}; EC=3.6.1.- {ECO:0000313|EMBL:EEV01262.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ADP-ribose pyrophosphatase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KV07_9FIRM
L3_114_000M1_scaffold_120_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9043..12024)
DNA (2982bp) protein (994aa)
Helicase C-terminal domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GA84_9FIRM
Helicase C-terminal domain protein {ECO:0000313|EMBL:EEV01261.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
DNA or RNA helicases of superfamily II
L3_114_000M1_scaffold_120_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12379..13524
DNA (1146bp) protein (382aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme n=2 Tax=Roseburia intestinalis RepID=D4KNB7_9FIRM
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:EEV01259.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_114_000M1_scaffold_120_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13521..14441
DNA (921bp) protein (307aa)
Radical SAM protein, TIGR01212 family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNB6_9FIRM
radical SAM protein, TIGR01212 family
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:CBL08368.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_120_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14469..14984
DNA (516bp) protein (172aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GA80_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57555.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_120_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14996..15616
DNA (621bp) protein (207aa)
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family n=2 Tax=Roseburia intestinalis RepID=D4KZS4_9FIRM
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family {ECO:0000313|EMBL:CBL12864.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_120_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15639..17339)
DNA (1701bp) protein (567aa)
Oligoendopeptidase M3 family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B045_9FIRM
Oligoendopeptidase M3 family {ECO:0000313|EMBL:CDA57553.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
oligoendopeptidase, M3 family
L3_114_000M1_scaffold_120_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17403..18584)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GA77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01279.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_114_000M1_scaffold_120_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18686..19714)
DNA (1029bp) protein (343aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) n=3 Tax=Roseburia intestinalis RepID=D4KNB1_9FIRM
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBL08363.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_120_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19819..20835)
DNA (1017bp) protein (339aa)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) n=4 Tax=Roseburia RepID=D4KNB0_9FIRM
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBL12861.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_120_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20835..21899)
DNA (1065bp) protein (355aa)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) n=2 Tax=Roseburia RepID=D4KZS0_9FIRM
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBL12860.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_120_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21892..23412)
DNA (1521bp) protein (507aa)
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) n=3 Tax=Roseburia RepID=D4KNA8_9FIRM
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter ATP-binding protein CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CDA57532.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_120_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23484..24620)
DNA (1137bp) protein (379aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNA7_9FIRM
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBL08359.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_120_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24806..26263)
DNA (1458bp) protein (486aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain n=3 Tax=Roseburia RepID=D4KNA6_9FIRM
L3_114_000M1_scaffold_120_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26260..27915)
DNA (1656bp) protein (552aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNA5_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CBL08357.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_120_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28097..29590)
DNA (1494bp) protein (498aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.13 1.4.1.14)
Glutamate synthase (NADH) small subunit {ECO:0000313|EMBL:CBL12853.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CBL12853.1};; EC=1.4.1.14 {ECO:0000313|EMBL:CBL12853.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Glutamate synthase (NADH) small subunit n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZR3_9FIRM
L3_114_000M1_scaffold_120_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29649..34223)
DNA (4575bp) protein (1525aa)
Glutamate synthase domain 2 (EC:1.4.1.13 1.4.1.14)
Glutamate synthase domain 2 {ECO:0000313|EMBL:CBL08354.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CBL08354.1};; EC=1.4.1.14 {ECO:0000313|EMBL:CBL08354.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Glutamate synthase domain 2 n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNA2_9FIRM
L3_114_000M1_scaffold_120_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34756..35037)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZR0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12850.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Displaying items 1-30 of 56 in total

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