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L3_114_000M1_scaffold_121

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Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_121_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(108..1088)
DNA (981bp) protein (327aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=V8BYG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19825.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L3_114_000M1_scaffold_121_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1354..1713
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CLR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY33629.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_121_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1788..2279
DNA (492bp) protein (164aa)
Heptaprenyl diphosphate synthase component I n=2 Tax=Ruminococcus lactaris RepID=B5CLR2_9FIRM
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:EDY33630.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_121_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2327..2944
DNA (618bp) protein (206aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Holliday junction ATP-dependent DNA helicase RuvA n=2 Tax=Ruminococcus lactaris RepID=B5CLR3_9FIRM
Holliday junction DNA helicase subunit RuvA
L3_114_000M1_scaffold_121_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2961..3959
DNA (999bp) protein (333aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Ruminococcus lactaris RepID=B5CLR4_9FIRM
Holliday junction DNA helicase, RuvB subunit
L3_114_000M1_scaffold_121_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4071..4481
DNA (411bp) protein (137aa)
Cell division protein ZapA n=4 Tax=Clostridiales RepID=D4M5Q5_9FIRM
cell division protein ZapA
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473, ECO:0000313|EMBL:CBL26567.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_114_000M1_scaffold_121_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4561..7020
DNA (2460bp) protein (820aa)
Peptidase, U32 family {ECO:0000313|EMBL:EDY33634.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDY33634.1};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=2 Tax=Ruminococcus lactaris RepID=B5CLR6_9FIRM
L3_114_000M1_scaffold_121_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7033..8550
DNA (1518bp) protein (506aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=2 Tax=Ruminococcus lactaris RepID=B5CLR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19818.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Bacterial cell division membrane protein
L3_114_000M1_scaffold_121_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8633..9937
DNA (1305bp) protein (435aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Penicillin-binding protein, transpeptidase domain protein n=2 Tax=Ruminococcus lactaris RepID=B5CLR8_9FIRM
Cell division protein FtsI/penicillin-binding protein 2
L3_114_000M1_scaffold_121_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9960..10313
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=V8BZ90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19816.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_114_000M1_scaffold_121_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10310..11263
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CLS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY33638.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Protein of unknown function (DUF2953).
L3_114_000M1_scaffold_121_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11283..11684
DNA (402bp) protein (134aa)
Sporulation protein YtfJ n=2 Tax=Ruminococcus lactaris RepID=B5CLS1_9FIRM
Sporulation protein YtfJ {ECO:0000313|EMBL:EDY33639.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_121_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11751..11882)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BXB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19813.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_114_000M1_scaffold_121_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12005..12190)
DNA (186bp) protein (62aa)
50S ribosomal protein L28 n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BYA8_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
LSU ribosomal protein L28P
L3_114_000M1_scaffold_121_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12372..12734
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CLS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY33641.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_121_16
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12747..14408
DNA (1662bp) protein (554aa)
DAK2 domain fusion protein YloV n=2 Tax=Ruminococcus lactaris RepID=B5CLS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19810.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Dak phosphatase
L3_114_000M1_scaffold_121_17
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14519..16579
DNA (2061bp) protein (687aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EDY33643.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDY33643.1};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CLS5_9FIRM
L3_114_000M1_scaffold_121_18
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

16725..20288
DNA (3564bp) protein (1188aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V7B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92960.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
cell surface protein
L3_114_000M1_scaffold_121_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20494..20700
DNA (207bp) protein (69aa)
Small, acid-soluble spore protein, alpha/beta type n=2 Tax=Ruminococcus lactaris RepID=B5CLS7_9FIRM
Small, acid-soluble spore protein C1 {ECO:0000313|EMBL:ETD19808.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Small, acid-soluble spore proteins, alpha/beta type.
L3_114_000M1_scaffold_121_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20867..21436
DNA (570bp) protein (190aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EDY33646.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDY33646.1};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
RNA methyltransferase, RsmD family n=2 Tax=Ruminococcus lactaris RepID=B5CLS8_9FIRM
RNA methyltransferase, RsmD family
L3_114_000M1_scaffold_121_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21430..21924
DNA (495bp) protein (165aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
pantetheine-phosphate adenylyltransferase, bacterial (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=2 Tax=Ruminococcus lactaris RepID=B5CLS9_9FIRM
L3_114_000M1_scaffold_121_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21924..22517
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CLT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY33648.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_121_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22553..23461)
DNA (909bp) protein (303aa)
Putative sporulation integral membrane protein YlbJ n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CLT1_9FIRM
Putative sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:EDY33649.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_121_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23630..24526
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JD03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26742.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Membrane proteins related to metalloendopeptidases
L3_114_000M1_scaffold_121_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24596..25978
DNA (1383bp) protein (461aa)
NOL1/NOP2/sun family protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CLT5_9FIRM
NOL1/NOP2/sun family protein {ECO:0000313|EMBL:EDY33653.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_114_000M1_scaffold_121_26
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25975..26715
DNA (741bp) protein (247aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CLT6_9FIRM
L3_114_000M1_scaffold_121_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26712..28652
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BXE1_9FIRM
UPF0313 protein HMPREF1202_02013 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Fe-S oxidoreductase
L3_114_000M1_scaffold_121_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28660..29418
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BX97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19798.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Short-chain dehydrogenases of various substrate specificities
L3_114_000M1_scaffold_121_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29455..30033
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BY97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19797.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_114_000M1_scaffold_121_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30062..31057
DNA (996bp) protein (332aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BZ72_9FIRM
Displaying items 1-30 of 142 in total

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