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L3_114_000M1_scaffold_128

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_128_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(130..2043)
DNA (1914bp) protein (638aa)
HTH domain protein n=3 Tax=Firmicutes RepID=E4LRI7_9CLOT
PRD domain protein {ECO:0000313|EMBL:EQJ60116.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
BigG family transcription antiterminator
L3_114_000M1_scaffold_128_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2209..2514
DNA (306bp) protein (102aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Firmicutes RepID=E4LRI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC87516.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
lichenan-specific phosphotransferase enzyme iib component
L3_114_000M1_scaffold_128_3
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2531..3787
DNA (1257bp) protein (419aa)
PTS system, lactose/cellobiose family IIC component n=2 Tax=Firmicutes RepID=E4LRI5_9CLOT
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
PTS system, IIC component
L3_114_000M1_scaffold_128_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3793..4131
DNA (339bp) protein (113aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1AWM6_9FIRM
PTS system, Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:EQJ60113.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
cellobiose-specific PTS system IIA component
L3_114_000M1_scaffold_128_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4128..5537
DNA (1410bp) protein (470aa)
Aryl-phospho-beta-D-glucosidase BglH {ECO:0000313|EMBL:EQJ60112.1}; EC=3.2.1.86 {ECO:0000313|EMBL:EQJ60112.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
bglH; phospho-beta-glucosidase BglH (EC:3.2.1.86)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AWM5_9FIRM
L3_114_000M1_scaffold_128_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5746..7368
DNA (1623bp) protein (541aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Clostridium sp. HGF2 RepID=E4LRI2_9CLOT
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EFR38622.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
oppA; oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily
L3_114_000M1_scaffold_128_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7519..8721
DNA (1203bp) protein (401aa)
amidohydrolase (EC:3.5.1.-)
Amidohydrolase n=5 Tax=Firmicutes RepID=E4LRI1_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:EQJ60110.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000M1_scaffold_128_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8957..9418
DNA (462bp) protein (154aa)
PTS system, fructose subfamily, IIA component domain protein {ECO:0000313|EMBL:EQJ60109.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQJ60109.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system, fructose specific enzyme II, A component (EC:2.7.1.69)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=5 Tax=Firmicutes RepID=E4LRI0_9CLOT
L3_114_000M1_scaffold_128_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9434..9748
DNA (315bp) protein (105aa)
PTS system, Fru family, IIB component n=5 Tax=Firmicutes RepID=E4LRH9_9CLOT
PTS fructose transporter subunit IIB {ECO:0000313|EMBL:KGJ52771.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_114_000M1_scaffold_128_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9759..10808
DNA (1050bp) protein (350aa)
PTS system, Fru family, IIC component domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NXR1_CLODI
PTS system, Fru family, IIC component domain protein {ECO:0000313|EMBL:EQJ60107.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system, fructose specific enzyme IIC component
L3_114_000M1_scaffold_128_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10824..11639
DNA (816bp) protein (272aa)
Ketose-bisphosphate aldolase n=3 Tax=Firmicutes RepID=E4LRH7_9CLOT
Ketose-bisphosphate aldolase family protein {ECO:0000313|EMBL:EQJ60106.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ketose-bisphosphate aldolase
L3_114_000M1_scaffold_128_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11682..13652
DNA (1971bp) protein (657aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
PRD domain protein n=5 Tax=Firmicutes RepID=E4LRH6_9CLOT
PRD domain protein {ECO:0000313|EMBL:EQJ60105.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000M1_scaffold_128_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13783..14592
DNA (810bp) protein (270aa)
Transcriptional regulator, MerR family n=5 Tax=Firmicutes RepID=E4LRH5_9CLOT
MerR regulatory family protein {ECO:0000313|EMBL:EQJ60104.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000M1_scaffold_128_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14589..15632
DNA (1044bp) protein (348aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LRH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38584.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_114_000M1_scaffold_128_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15791..16261
DNA (471bp) protein (157aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=3 Tax=Firmicutes RepID=E4LRH3_9CLOT
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EFR38587.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
pts31A; fructose-like phosphotransferase system subunit EIIA
L3_114_000M1_scaffold_128_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16434..17594
DNA (1161bp) protein (387aa)
NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:EFR38616.1}; EC=1.1.1.- {ECO:0000313|EMBL:EFR38616.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
NADH-dependent butanol dehydrogenase A n=3 Tax=Firmicutes RepID=E4LRH1_9CLOT
iron-containing alcohol dehydrogenase
L3_114_000M1_scaffold_128_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18235..20382
DNA (2148bp) protein (716aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89204.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
transcriptional antiterminator, BglG family/transcriptional regulator
L3_114_000M1_scaffold_128_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20387..20827
DNA (441bp) protein (147aa)
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) (EC:2.7.1.69)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=2 Tax=Clostridiales RepID=E4LRG8_9CLOT
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein {ECO:0000313|EMBL:EQJ60097.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000M1_scaffold_128_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20865..21152
DNA (288bp) protein (96aa)
Phosphotransferase system, galactitol-specific IIB component (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=3 Tax=Firmicutes RepID=E4LRG7_9CLOT
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EQJ60096.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000M1_scaffold_128_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21184..22467
DNA (1284bp) protein (428aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1BDH4_9FIRM
PTS system sugar-specific permease component family protein {ECO:0000313|EMBL:EQJ60095.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system Galactitol-specific IIC component
L3_114_000M1_scaffold_128_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22478..22858
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LRG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ60094.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Tetratricopeptide repeat.
L3_114_000M1_scaffold_128_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22898..23734
DNA (837bp) protein (279aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Ketose-bisphosphate aldolase n=2 Tax=Clostridiales RepID=E4LRG4_9CLOT
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EFR38583.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_128_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23817..24419
DNA (603bp) protein (201aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1AWK7_9FIRM
AAA domain protein {ECO:0000313|EMBL:EQJ60092.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Zeta toxin.
L3_114_000M1_scaffold_128_24
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25068..25595
DNA (528bp) protein (176aa)
Sigma-70 region 2 n=5 Tax=Firmicutes RepID=E4LRG0_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CDC87538.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_114_000M1_scaffold_128_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25592..26326
DNA (735bp) protein (245aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LRF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38651.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_128_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26319..27494
DNA (1176bp) protein (392aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LRF8_9CLOT
ABC-2 transporter family protein {ECO:0000313|EMBL:EQJ60087.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_114_000M1_scaffold_128_27
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27629..28492
DNA (864bp) protein (288aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=E4LRF7_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR38608.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC transporter ATP-binding protein
L3_114_000M1_scaffold_128_28
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28489..29823
DNA (1335bp) protein (445aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E4LRF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38632.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_128_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30124..31791
DNA (1668bp) protein (556aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LRF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ60084.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000M1_scaffold_128_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31997..33046
DNA (1050bp) protein (350aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LRF4_9CLOT
Suppressor of fused family protein {ECO:0000313|EMBL:EQJ60083.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
Displaying items 1-30 of 46 in total

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