ggKbase home page

L3_114_000M1_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_232_1
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..194)
DNA (192bp) protein (64aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CBL42428.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CBL42428.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Xaa-Pro aminopeptidase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX86_9FIRM
L3_114_000M1_scaffold_232_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(338..1489)
DNA (1152bp) protein (384aa)
aspartate--ammonia ligase, AsnA-type (EC:6.3.1.1)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Aspartate--ammonia ligase, AsnA-type n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX87_9FIRM
L3_114_000M1_scaffold_232_3
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1560..2306
DNA (747bp) protein (249aa)
Response regulator of the LytR/AlgR family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX88_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBL42430.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_232_4
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2287..3585
DNA (1299bp) protein (433aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX89_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42431.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_232_5
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3688..4776)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GBA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10097.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
cell wall binding repeat-containing protein
L3_114_000M1_scaffold_232_6
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4822..6861)
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FYG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10095.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_114_000M1_scaffold_232_7
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6845..9175)
DNA (2331bp) protein (777aa)
Predicted exporters of the RND superfamily n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX90_9FIRM
Predicted exporters of the RND superfamily {ECO:0000313|EMBL:CBL42432.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Predicted exporters of the RND superfamily
L3_114_000M1_scaffold_232_8
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9251..10003)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FZ30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10093.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_114_000M1_scaffold_232_9
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10157..10750
DNA (594bp) protein (198aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:81 RepID=R5GBA4_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCY10092.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Transcriptional regulator
L3_114_000M1_scaffold_232_10
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10923..12461)
DNA (1539bp) protein (513aa)
Amino acid carrier protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX93_9FIRM
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:CBL42435.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_232_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12674..14383)
DNA (1710bp) protein (570aa)
Subtilisin-like serine proteases n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX94_9FIRM
Subtilisin-like serine proteases
Subtilisin-like serine proteases {ECO:0000313|EMBL:CBL42436.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_232_12
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14571..15371)
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX95_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42437.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_232_13
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15502..16533)
DNA (1032bp) protein (344aa)
Esterase/lipase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX96_9FIRM
Esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:CBL42438.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_232_14
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16595..18472)
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GC61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10076.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_114_000M1_scaffold_232_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18746..19417)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0APY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ34849.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
cell wall hydrolase SleB
L3_114_000M1_scaffold_232_16
unknown

Not on your lists

comp(19484..19699)
DNA (216bp) protein (72aa)

This feature has no annotations

L3_114_000M1_scaffold_232_17
unknown

Not on your lists

19819..20094
DNA (276bp) protein (92aa)

This feature has no annotations

L3_114_000M1_scaffold_232_18
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20246..20488)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=J4K865_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETO99177.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
hypothetical protein
L3_114_000M1_scaffold_232_19
unknown

Not on your lists

comp(20501..20773)
DNA (273bp) protein (91aa)

This feature has no annotations

L3_114_000M1_scaffold_232_20
unknown

Not on your lists

comp(20800..21015)
DNA (216bp) protein (72aa)

This feature has no annotations

L3_114_000M1_scaffold_232_21
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21025..21540)
DNA (516bp) protein (172aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:CBL41316.1}; EC=3.6.1.23 {ECO:0000313|EMBL:CBL41316.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GU24_9FIRM
L3_114_000M1_scaffold_232_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21540..21866)
DNA (327bp) protein (109aa)
Uncharacterized protein n=3 Tax=Clostridium clostridioforme RepID=N9YLV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ34852.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L3_114_000M1_scaffold_232_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21881..22432)
DNA (552bp) protein (184aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.17.4.2 1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXJ8_RUMGN
L3_114_000M1_scaffold_232_24
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22432..23538)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y450_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59248.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
AP2 domain-containing protein
L3_114_000M1_scaffold_232_25
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23606..25837)
DNA (2232bp) protein (744aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YNZ3_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EPD59247.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_114_000M1_scaffold_232_26
unknown

Not on your lists

comp(25853..25981)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_114_000M1_scaffold_232_27
unknown

Not on your lists

comp(26024..26278)
DNA (255bp) protein (85aa)

This feature has no annotations

L3_114_000M1_scaffold_232_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26275..26826)
DNA (552bp) protein (184aa)
Guanylate kinase {ECO:0000313|EMBL:EDN79502.1}; EC=2.7.4.8 {ECO:0000313|EMBL:EDN79502.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Guanylate kinase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXK1_RUMGN
hypothetical protein
L3_114_000M1_scaffold_232_29
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26829..28841)
DNA (2013bp) protein (671aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RTQ4_9FIRM
L3_114_000M1_scaffold_232_30
unknown

Not on your lists

comp(28838..29056)
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying items 1-30 of 85 in total

View Taxonomy