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L3_114_000M1_scaffold_254

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_254_1
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..530)
DNA (528bp) protein (176aa)
Rubrerythrin n=12 Tax=Bacteroides RepID=D6D3X5_9BACE
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CBK69127.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_114_000M1_scaffold_254_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(553..936)
DNA (384bp) protein (128aa)
Transcriptional regulator, Fur family n=6 Tax=Bacteroides RepID=A7LRE9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY65231.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Fe2+/Zn2+ uptake regulation proteins
L3_114_000M1_scaffold_254_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1185..1685)
DNA (501bp) protein (167aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7LRE7_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN01829.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_114_000M1_scaffold_254_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1701..2459)
DNA (759bp) protein (253aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7LRE6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64949.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Protein of unknown function (DUF1573).
L3_114_000M1_scaffold_254_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2468..4537)
DNA (2070bp) protein (690aa)
Peptidase, S8/S53 family n=3 Tax=Bacteroides ovatus RepID=A7LRE5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY65234.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Subtilisin-like serine proteases
L3_114_000M1_scaffold_254_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4549..6258)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YQZ0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64947.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Leucine Rich Repeat.
L3_114_000M1_scaffold_254_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6289..8943)
DNA (2655bp) protein (885aa)
Leucine Rich Repeat protein n=4 Tax=Bacteroides RepID=A7LTS8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64946.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_114_000M1_scaffold_254_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8961..10523)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7LTS9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY65237.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_114_000M1_scaffold_254_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10543..11433)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9HWX4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64944.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_114_000M1_scaffold_254_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11459..12982)
DNA (1524bp) protein (508aa)
SusD family protein n=3 Tax=Bacteroides RepID=A7LTT1_BACOV
SusD family protein {ECO:0000313|EMBL:EDO12987.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
SusD family.
L3_114_000M1_scaffold_254_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12995..15928)
DNA (2934bp) protein (978aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YQY5_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY64942.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Outer membrane receptor proteins, mostly Fe transport
L3_114_000M1_scaffold_254_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16575..18500
DNA (1926bp) protein (642aa)
NH(3)-dependent NAD(+) synthetase (EC:6.3.5.1 6.3.1.5)
NAD+ synthetase n=2 Tax=Bacteroides RepID=E5C3L7_9BACE
NAD+ synthetase {ECO:0000313|EMBL:EIY64941.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_114_000M1_scaffold_254_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18618..19208)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YP75_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64940.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Protein tyrosine/serine phosphatase
L3_114_000M1_scaffold_254_14
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19208..20332)
DNA (1125bp) protein (375aa)
imidazoleglycerol-phosphate dehydratase/histidinol-phosphate phosphatase (EC:3.1.3.15 4.2.1.19)
Histidine biosynthesis bifunctional protein HisB n=5 Tax=Bacteroides RepID=A7LTT6_BACOV
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|HAMAP-Rule:MF_01022, ECO:0000256|SAAS:SAAS00021560}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
L3_114_000M1_scaffold_254_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20336..21445)
DNA (1110bp) protein (370aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
histidinol phosphate aminotransferase apoenzyme (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=3 Tax=Bacteroides ovatus RepID=I9HXN9_BACOV
L3_114_000M1_scaffold_254_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21393..22682)
DNA (1290bp) protein (430aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=3 Tax=Bacteroides ovatus RepID=A7LTT8_BACOV
L3_114_000M1_scaffold_254_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22724..23575)
DNA (852bp) protein (284aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
ATP phosphoribosyltransferase (homohexameric) (EC:2.4.2.17)
ATP phosphoribosyltransferase n=4 Tax=Bacteroides RepID=A7LTT9_BACOV
L3_114_000M1_scaffold_254_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23834..24325)
DNA (492bp) protein (164aa)
Thioesterase family protein n=6 Tax=Bacteroides RepID=A7LTU1_BACOV
Thioesterase family protein {ECO:0000313|EMBL:EDO12997.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Uncharacterized protein, possibly involved in aromatic compounds catabolism
L3_114_000M1_scaffold_254_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24399..26306)
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9HWW7_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64934.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_114_000M1_scaffold_254_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26611..27267)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9T849_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64933.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Protein of unknown function (DUF2490).
L3_114_000M1_scaffold_254_21
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27422..28987
DNA (1566bp) protein (522aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8YQX7_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40724.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_114_000M1_scaffold_254_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29120..30496)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9T7K0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64931.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Sugar phosphate permease
L3_114_000M1_scaffold_254_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30509..31408)
DNA (900bp) protein (300aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YP65_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64930.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_114_000M1_scaffold_254_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31429..32487)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9HWW3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64929.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_114_000M1_scaffold_254_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32489..33370)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9T845_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64928.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Sugar phosphate isomerases/epimerases
L3_114_000M1_scaffold_254_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33377..35341)
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YQX3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64927.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
FOG: WD40-like repeat
L3_114_000M1_scaffold_254_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35369..36760)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9T7J6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64926.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
RagB/SusD domain-containing protein
L3_114_000M1_scaffold_254_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36784..40227)
DNA (3444bp) protein (1148aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YP59_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY64925.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Outer membrane receptor proteins, mostly Fe transport
L3_114_000M1_scaffold_254_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40274..40408
DNA (135bp) protein (45aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7LTV3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY65258.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_114_000M1_scaffold_254_30
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40436..41425)
DNA (990bp) protein (330aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=E5C3N4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ91598.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
Fe2+-dicitrate sensor, membrane component
Displaying items 1-30 of 33 in total

View Taxonomy