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L3_114_000M1_scaffold_263

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_263_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..322
DNA (321bp) protein (107aa)
Electron transfer flavoprotein domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5L1_9FIRM
Electron transfer flavoprotein, beta subunit
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:CBK99448.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000M1_scaffold_263_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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344..1438
DNA (1095bp) protein (365aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5L2_9FIRM
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EEU96805.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Electron transfer flavoprotein, alpha subunit
L3_114_000M1_scaffold_263_3
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1596..3122
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R0Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC27957.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L3_114_000M1_scaffold_263_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3284..4684
DNA (1401bp) protein (467aa)
Putative permease n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5L5_9FIRM
Putative permease {ECO:0000313|EMBL:EEU96808.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
uracil-xanthine permease
L3_114_000M1_scaffold_263_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4694..5380)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96810.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Uncharacterized MobA-related protein
L3_114_000M1_scaffold_263_6
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5490..6275
DNA (786bp) protein (262aa)
Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q4J4_9FIRM
Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs {ECO:0000313|EMBL:CDC27949.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
L3_114_000M1_scaffold_263_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6282..6755
DNA (474bp) protein (158aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs (EC:1.2.99.2)
2Fe-2S iron-sulfur cluster-binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5L9_9FIRM
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:EEU96812.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_114_000M1_scaffold_263_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6752..9040
DNA (2289bp) protein (763aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5M0_9FIRM
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein {ECO:0000313|EMBL:EEU96813.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_114_000M1_scaffold_263_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9040..9744
DNA (705bp) protein (235aa)
Putative selenium-dependent hydroxylase accessory protein YqeC n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5M1_9FIRM
Putative selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:EEU96814.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
probable selenium-dependent hydroxylase accessory protein YqeC
L3_114_000M1_scaffold_263_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9746..10783
DNA (1038bp) protein (346aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
selenophosphate synthase (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5M2_9FIRM
L3_114_000M1_scaffold_263_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10798..11430
DNA (633bp) protein (211aa)
Selenium metabolism protein YedF n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5M3_9FIRM
Selenium metabolism protein YedF {ECO:0000313|EMBL:EEU96816.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
selenium metabolism protein YedF
L3_114_000M1_scaffold_263_12
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11427..12560
DNA (1134bp) protein (378aa)
Cysteine desulfurase family protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QAY0_9FIRM
Cysteine desulfurase family protein {ECO:0000313|EMBL:CDC27941.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
cysteine desulfurase family protein
L3_114_000M1_scaffold_263_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12564..12794
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96819.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Protein of unknown function (DUF3343).
L3_114_000M1_scaffold_263_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12813..13844
DNA (1032bp) protein (344aa)
Putative xanthine dehydrogenase accessory factor n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5M7_9FIRM
Putative xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:EEU96820.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
L3_114_000M1_scaffold_263_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13848..14663
DNA (816bp) protein (272aa)
Selenium-dependent molybdenum hydroxylase system protein, YqeB family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5M8_9FIRM
Selenium-dependent molybdenum hydroxylase system protein, YqeB family {ECO:0000313|EMBL:EEU96821.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
selenium-dependent molybdenum hydroxylase system protein, YqeB family
L3_114_000M1_scaffold_263_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14703..15245)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5M9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96822.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_114_000M1_scaffold_263_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15338..16273)
DNA (936bp) protein (312aa)
S1 RNA binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5N0_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EEU96823.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Ribosomal protein S1
L3_114_000M1_scaffold_263_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16470..16661
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96824.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_114_000M1_scaffold_263_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16693..17784
DNA (1092bp) protein (364aa)
Peptide chain release factor 1 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5N2_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
bacterial peptide chain release factor 1 (bRF-1)
L3_114_000M1_scaffold_263_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17863..18897
DNA (1035bp) protein (345aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHW1_9FIRM
translation factor SUA5
L3_114_000M1_scaffold_263_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18894..19523
DNA (630bp) protein (210aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5N4_9FIRM
L3_114_000M1_scaffold_263_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19520..20083
DNA (564bp) protein (188aa)
Transglycosylase SLT domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5N5_9FIRM
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EEU96716.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
L3_114_000M1_scaffold_263_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20166..21566
DNA (1401bp) protein (467aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
M18 family aminopeptidase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5N6_9FIRM
Aspartyl aminopeptidase
L3_114_000M1_scaffold_263_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21691..22461
DNA (771bp) protein (257aa)
Transcriptional regulator, MerR family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5N7_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEU96718.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted transcriptional regulators
L3_114_000M1_scaffold_263_25
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22421..23269)
DNA (849bp) protein (283aa)
Polysaccharide deacetylase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PT79_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CDC27588.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted xylanase/chitin deacetylase
L3_114_000M1_scaffold_263_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23868..25091
DNA (1224bp) protein (408aa)
SpoIVB peptidase {ECO:0000313|EMBL:EEU96721.1}; EC=3.4.21.- {ECO:0000313|EMBL:EEU96721.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
stage IV sporulation protein B (EC:3.4.21.116)
SpoIVB peptidase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5P0_9FIRM
L3_114_000M1_scaffold_263_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25227..25985
DNA (759bp) protein (253aa)
Putative sporulation transcription factor Spo0A n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5P1_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_114_000M1_scaffold_263_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26145..26348
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96723.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_114_000M1_scaffold_263_29
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

26422..26607
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22529.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_114_000M1_scaffold_263_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26567..26995
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96725.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
Displaying items 1-30 of 46 in total

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