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L3_114_000M1_scaffold_268

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_268_1
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..259)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1D0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98368.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_114_000M1_scaffold_268_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(256..816)
DNA (561bp) protein (187aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0K4_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBK91375.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_114_000M1_scaffold_268_3
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(900..1103)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LWM3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL22026.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_114_000M1_scaffold_268_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1777..2139)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FRB2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10987.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_268_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2154..2408)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FRB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00880.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_114_000M1_scaffold_268_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2462..3133)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94855.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_114_000M1_scaffold_268_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3143..3496)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUE9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10989.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_268_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3557..4642)
DNA (1086bp) protein (362aa)
NlpC/P60 family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBC7_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:EEV00876.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_114_000M1_scaffold_268_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4618..5127)
DNA (510bp) protein (170aa)
AIG2-like family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBC6_9FIRM
AIG2-like family protein {ECO:0000313|EMBL:EEV00875.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
AIG2-like family.
L3_114_000M1_scaffold_268_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5158..6177)
DNA (1020bp) protein (340aa)
Putative amidoligase enzyme n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUF3_9FIRM
Putative amidoligase enzyme.
Putative amidoligase enzyme {ECO:0000313|EMBL:CBL10993.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_268_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6210..8045)
DNA (1836bp) protein (612aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUF4_9FIRM
Domain of unknown function DUF87.
Uncharacterized protein {ECO:0000313|EMBL:CBL10994.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_268_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8038..8610)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4KUF5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10995.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_268_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8594..8872)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUF6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10996.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_268_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8853..10274)
DNA (1422bp) protein (474aa)
Cytosine-specific methyltransferase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUF7_9FIRM
DNA-methyltransferase (dcm)
DNA-methyltransferase (Dcm) {ECO:0000313|EMBL:CBL10997.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_268_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10287..11147)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00869.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_114_000M1_scaffold_268_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11173..11511)
DNA (339bp) protein (113aa)
Uncharacterized protein n=3 Tax=root RepID=C0FRC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94866.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_114_000M1_scaffold_268_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11541..12008)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00867.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_114_000M1_scaffold_268_18
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12016..13785)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94868.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_114_000M1_scaffold_268_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13892..14437)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00896.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_114_000M1_scaffold_268_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14550..15044)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00895.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_114_000M1_scaffold_268_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15095..15499)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00894.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_114_000M1_scaffold_268_22
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15523..16395)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FRD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94874.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_114_000M1_scaffold_268_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16410..17339)
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7GBB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00891.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_114_000M1_scaffold_268_24
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17333..18688)
DNA (1356bp) protein (452aa)
Type II/IV secretion system protein n=3 Tax=root RepID=C0FRD7_9FIRM
Type II/IV secretion system protein {ECO:0000313|EMBL:EEG94877.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Flp pilus assembly protein, ATPase CpaF
L3_114_000M1_scaffold_268_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18685..19494)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00889.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_114_000M1_scaffold_268_26
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19498..20346)
DNA (849bp) protein (283aa)
Flp pilus assembly protein CpaB n=2 Tax=Roseburia RepID=C0FRD9_9FIRM
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EEG94880.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Flp pilus assembly protein CpaB
L3_114_000M1_scaffold_268_27
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20588..21871)
DNA (1284bp) protein (428aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JRG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34983.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Retron-type reverse transcriptase
L3_114_000M1_scaffold_268_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22336..22743)
DNA (408bp) protein (136aa)
Flp pilus assembly protein, protease CpaA (EC:3.4.23.43)
Flp pilus assembly protein, protease CpaA {ECO:0000313|EMBL:CBL10999.1}; EC=3.4.23.43 {ECO:0000313|EMBL:CBL10999.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Flp pilus assembly protein, protease CpaA n=2 Tax=Roseburia intestinalis RepID=D4KUF9_9FIRM
L3_114_000M1_scaffold_268_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22745..23161)
DNA (417bp) protein (139aa)
SpoVG n=2 Tax=Roseburia intestinalis RepID=D4KUG0_9FIRM
SpoVG.
SpoVG {ECO:0000313|EMBL:CBL11000.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_268_30
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23222..23452)
DNA (231bp) protein (77aa)
Uncharacterized protein n=3 Tax=root RepID=C0FUB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93927.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
Displaying items 1-30 of 56 in total

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