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L3_114_000M1_scaffold_287

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_287_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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194..2131
DNA (1938bp) protein (646aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL13495.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
L3_114_000M1_scaffold_287_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2245..2502
DNA (258bp) protein (86aa)
Phosphotransferase System HPr (HPr) Family n=4 Tax=Roseburia RepID=D4L1K6_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CBL13496.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_287_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2572..4197
DNA (1626bp) protein (542aa)
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732, ECO:0000313|EMBL:CBL13497.1};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1K7_9FIRM
L3_114_000M1_scaffold_287_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4545..5807
DNA (1263bp) protein (421aa)
Amidohydrolase family protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ATB3_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:CDA55158.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Imidazolonepropionase and related amidohydrolases
L3_114_000M1_scaffold_287_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5908..6789
DNA (882bp) protein (294aa)
VanW-like protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5X1_9FIRM
Uncharacterized vancomycin resistance protein
VanW-like protein {ECO:0000313|EMBL:EEV02853.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_114_000M1_scaffold_287_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6948..8474
DNA (1527bp) protein (509aa)
Eco57I restriction endonuclease n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5X0_9FIRM
Eco57I restriction endonuclease {ECO:0000313|EMBL:EEV02852.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted O-methyltransferase
L3_114_000M1_scaffold_287_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8498..9490
DNA (993bp) protein (331aa)
BsuBI/PstI restriction endonuclease C-terminus. (EC:3.1.21.4)
BsuBI/PstI restriction endonuclease C-terminus {ECO:0000313|EMBL:CBL10270.1}; EC=3.1.21.4 {ECO:0000313|EMBL:CBL10270.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
BsuBI/PstI restriction endonuclease C-terminus n=2 Tax=Roseburia intestinalis RepID=D4KTR8_9FIRM
L3_114_000M1_scaffold_287_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9503..10216
DNA (714bp) protein (238aa)
5'/3'-nucleotidase SurE (EC:3.1.3.5)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060, ECO:0000313|EMBL:CBL13501.1};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
5'-nucleotidase SurE n=2 Tax=Roseburia intestinalis RepID=D4L1L1_9FIRM
L3_114_000M1_scaffold_287_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10407..11381
DNA (975bp) protein (325aa)
Transcriptional regulator LacI family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ATC2_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDA55168.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
LacI family transcriptional regulator
L3_114_000M1_scaffold_287_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11473..12585
DNA (1113bp) protein (371aa)
Phosphate/phosphite/phosphonate ABC transporter periplasmic binding protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AVW7_9FIRM
Phosphate/phosphite/phosphonate ABC transporter periplasmic binding protein {ECO:0000313|EMBL:CDA55170.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
L3_114_000M1_scaffold_287_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12773..13534
DNA (762bp) protein (254aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Phosphonate ABC transporter, ATP-binding protein n=4 Tax=Roseburia RepID=D4KTS1_9FIRM
phosphonate ABC transporter, ATP-binding protein
L3_114_000M1_scaffold_287_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13534..14355
DNA (822bp) protein (274aa)
Phosphonate ABC transporter, permease protein PhnE n=3 Tax=Roseburia RepID=D4KTS2_9FIRM
phosphonate ABC transporter, permease protein PhnE
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:CBL10274.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_287_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14370..15179
DNA (810bp) protein (270aa)
Phosphonate ABC transporter, permease protein PhnE n=2 Tax=Roseburia intestinalis RepID=D4KTS3_9FIRM
phosphonate ABC transporter, permease protein PhnE
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:EEV02844.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_114_000M1_scaffold_287_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15268..16755
DNA (1488bp) protein (496aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTS4_9FIRM
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases {ECO:0000313|EMBL:CBL10276.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L3_114_000M1_scaffold_287_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17070..18845
DNA (1776bp) protein (592aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=4 Tax=Roseburia RepID=D4L1L7_9FIRM
L3_114_000M1_scaffold_287_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19080..20480
DNA (1401bp) protein (467aa)
Methyl-accepting chemotaxis protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AVX7_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDA55180.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Methyl-accepting chemotaxis protein
L3_114_000M1_scaffold_287_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20609..22609
DNA (2001bp) protein (667aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1L9_9FIRM
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases {ECO:0000313|EMBL:CBL13509.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L3_114_000M1_scaffold_287_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22606..23385
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02839.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_114_000M1_scaffold_287_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23398..23712
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G5V6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55185.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_287_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23735..24802)
DNA (1068bp) protein (356aa)
Cell envelope-like function transcriptional attenuator common domain protein n=2 Tax=Roseburia RepID=C7G5V5_9FIRM
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EEV02837.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
cell envelope-related function transcriptional attenuator common domain
L3_114_000M1_scaffold_287_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25080..25226
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02836.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_114_000M1_scaffold_287_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25204..25896
DNA (693bp) protein (231aa)
Regulatory protein VanR n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B2H0_9FIRM
Regulatory protein VanR {ECO:0000313|EMBL:CDA55189.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_114_000M1_scaffold_287_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25961..27982
DNA (2022bp) protein (674aa)
Sensor histidine kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AVY7_9FIRM
Signal transduction histidine kinase
Sensor histidine kinase {ECO:0000313|EMBL:CDA55190.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_287_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28136..30439
DNA (2304bp) protein (768aa)
Aconitase A {ECO:0000313|EMBL:CBL13516.1}; EC=4.2.1.3 {ECO:0000313|EMBL:CBL13516.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Aconitase A (EC:4.2.1.3)
Aconitase A n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1M6_9FIRM
L3_114_000M1_scaffold_287_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30594..31949
DNA (1356bp) protein (452aa)
Predicted permease n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ATE7_9FIRM
Predicted permease {ECO:0000313|EMBL:CDA55193.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted permease
L3_114_000M1_scaffold_287_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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32112..34778
DNA (2667bp) protein (889aa)
Putative tetratricopeptide repeat-containing domain protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AVZ2_9FIRM
Putative tetratricopeptide repeat-containing domain protein {ECO:0000313|EMBL:CDA55195.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_114_000M1_scaffold_287_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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34826..36724
DNA (1899bp) protein (633aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=2 Tax=Roseburia RepID=D4KTT5_9FIRM
L3_114_000M1_scaffold_287_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36971..40180
DNA (3210bp) protein (1070aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B2H8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55199.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_114_000M1_scaffold_287_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40196..40771)
DNA (576bp) protein (192aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=4 Tax=Roseburia RepID=D4KTT7_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDA55200.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_287_30
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(40823..42451)
DNA (1629bp) protein (543aa)
Resolvase, N-terminal domain protein n=2 Tax=Lachnospiraceae RepID=A5ZV57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC73912.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
putative site-specific recombinase
Displaying items 1-30 of 31 in total

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