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L3_114_000M1_scaffold_292

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_292_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..712
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GG38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99231.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted metal-dependent hydrolase
L3_114_000M1_scaffold_292_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(716..904)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6B9T7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09881.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_292_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1054..1437
DNA (384bp) protein (128aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GG40_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55815.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_292_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1518..1691
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6B430_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12968.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_292_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1732..2826
DNA (1095bp) protein (365aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CBL12967.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CBL12967.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L027_9FIRM
L3_114_000M1_scaffold_292_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2918..4525)
DNA (1608bp) protein (536aa)
CTP synthase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
CTP synthase n=3 Tax=Roseburia RepID=D4L026_9FIRM
L3_114_000M1_scaffold_292_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4794..6953
DNA (2160bp) protein (720aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458, ECO:0000313|EMBL:CBL09886.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Roseburia intestinalis RepID=D4KSN4_9FIRM
L3_114_000M1_scaffold_292_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7061..8941
DNA (1881bp) protein (627aa)
UvrABC system protein C n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AXP9_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
excinuclease ABC, C subunit
L3_114_000M1_scaffold_292_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9014..9955
DNA (942bp) protein (314aa)
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.4.- 2.7.11.-)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
HPr kinase/phosphorylase n=4 Tax=Roseburia RepID=D4KSN5_9FIRM
L3_114_000M1_scaffold_292_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10001..11401
DNA (1401bp) protein (467aa)
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387, ECO:0000313|EMBL:CBL09888.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
M18 family aminopeptidase n=2 Tax=Roseburia intestinalis RepID=D4L022_9FIRM
L3_114_000M1_scaffold_292_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11423..12331
DNA (909bp) protein (303aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Roseburia intestinalis RepID=D4L021_9FIRM
L3_114_000M1_scaffold_292_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12377..13252
DNA (876bp) protein (292aa)
UPF0042 nucleotide-binding protein ROI_30040 n=4 Tax=Roseburia RepID=D4KSN8_9FIRM
Predicted P-loop-containing kinase
Nucleotide-binding protein ROSINTL182_05100 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_114_000M1_scaffold_292_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13256..14149
DNA (894bp) protein (298aa)
Putative sporulation transcription regulator WhiA n=4 Tax=Roseburia RepID=D4KSN9_9FIRM
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_114_000M1_scaffold_292_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14323..14574
DNA (252bp) protein (84aa)
Phosphotransferase System HPr (HPr) Family n=3 Tax=Roseburia intestinalis RepID=D4L018_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CBL12958.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_292_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14596..15498
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KSP1_9FIRM
conserved protein of unknown function cotranscribed with Bmr (bmrU)
Putative phage tail component domain protein {ECO:0000313|EMBL:EEV03016.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_114_000M1_scaffold_292_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15591..16457
DNA (867bp) protein (289aa)
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist {ECO:0000313|EMBL:CBL09894.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBL09894.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist n=4 Tax=Roseburia RepID=D4KSP2_9FIRM
L3_114_000M1_scaffold_292_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16845..18965
DNA (2121bp) protein (707aa)
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein related to glutamine synthetase {ECO:0000313|EMBL:CBL09895.1}; EC=6.3.1.2 {ECO:0000313|EMBL:CBL09895.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Uncharacterized protein related to glutamine synthetase n=3 Tax=Roseburia RepID=D4KSP3_9FIRM
L3_114_000M1_scaffold_292_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19214..19552
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=3 Tax=Roseburia intestinalis RepID=D4KSP5_9FIRM
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EEV03012.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_114_000M1_scaffold_292_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19733..21076
DNA (1344bp) protein (448aa)
Ammonium transporter n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L012_9FIRM
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002, ECO:0000313|EMBL:CBL12952.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_292_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21185..22507)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BR64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55782.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_292_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22707..26930
DNA (4224bp) protein (1408aa)
Putative serine/threonine protein kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B9R2_9FIRM
Putative serine/threonine protein kinase {ECO:0000313|EMBL:CDA55781.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
NB-ARC domain.
L3_114_000M1_scaffold_292_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27056..27244
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G5C5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55780.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_292_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27304..27675
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7G5C4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12206.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_292_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27849..28124
DNA (276bp) protein (92aa)
Mor transcription activator family n=2 Tax=Roseburia RepID=D4KXW7_9FIRM
Mor transcription activator family {ECO:0000313|EMBL:CDA55768.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Mor transcription activator family.
L3_114_000M1_scaffold_292_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28167..28628
DNA (462bp) protein (154aa)
Uncharacterized protein/domain associated with GTPases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSQ5_9FIRM
Uncharacterized protein/domain associated with GTPases
Uncharacterized protein/domain associated with GTPases {ECO:0000313|EMBL:CBL09907.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_292_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28648..28818
DNA (171bp) protein (57aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6B9P9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55766.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_292_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28856..29236
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6AXK8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55765.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_114_000M1_scaffold_292_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29478..32267)
DNA (2790bp) protein (930aa)
penicillin-binding protein, 1A family (EC:2.4.1.- 3.4.-.-)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:CBL12211.1}; EC=2.4.1.- {ECO:0000313|EMBL:CBL12211.1};; EC=3.4.-.- {ECO:0000313|EMBL:CBL12211.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Penicillin-binding protein, 1A family n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXX1_9FIRM
L3_114_000M1_scaffold_292_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32544..33182
DNA (639bp) protein (213aa)
YigZ family protein n=4 Tax=Roseburia RepID=C7G5B6_9FIRM
conserved hypothetical protein TIGR00257
Uncharacterized protein {ECO:0000313|EMBL:CBL12213.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_000M1_scaffold_292_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33535..34278
DNA (744bp) protein (248aa)
Acyl-ACP thioesterase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5B5_9FIRM
Acyl-ACP thioesterase
Acyl-ACP thioesterase {ECO:0000313|EMBL:EEV02992.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Displaying items 1-30 of 73 in total

View Taxonomy