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L3_114_000M1_scaffold_337

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_337_1
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3..236)
DNA (234bp) protein (78aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Valine--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ATN1_BIFLN
valyl-tRNA synthase
L3_114_000M1_scaffold_337_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(380..1906)
DNA (1527bp) protein (509aa)
ABC-type dipeptide transport system, periplasmic component n=9 Tax=Bifidobacterium longum RepID=D6DAE1_BIFLN
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY23515.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_114_000M1_scaffold_337_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1968..2654)
DNA (687bp) protein (229aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Endonuclease III n=16 Tax=Bifidobacterium RepID=B3DU21_BIFLD
endonuclease III
L3_114_000M1_scaffold_337_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2713..3513)
DNA (801bp) protein (267aa)
Response regulator receiver protein n=13 Tax=Bifidobacterium longum RepID=D6ZXV1_BIFLJ
response regulator receiver protein
Trancriptional regulator GlnR {ECO:0000313|EMBL:ESV32855.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_114_000M1_scaffold_337_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3674..4378)
DNA (705bp) protein (235aa)
Uncharacterized protein n=6 Tax=Bifidobacterium longum RepID=C2GT11_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI81690.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_114_000M1_scaffold_337_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4487..5023)
DNA (537bp) protein (179aa)
Putative manganese efflux pump MntP n=18 Tax=Bifidobacterium RepID=MNTP_BIFLD
hypothetical protein
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_114_000M1_scaffold_337_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5305..5799)
DNA (495bp) protein (165aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Inorganic pyrophosphatase n=16 Tax=Bifidobacterium RepID=D6DAD6_BIFLN
inorganic pyrophosphatase
L3_114_000M1_scaffold_337_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6027..8267)
DNA (2241bp) protein (747aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=13 Tax=Bifidobacterium RepID=GLGE_BIFLO
glycosyl hydrolase
L3_114_000M1_scaffold_337_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8508..10502
DNA (1995bp) protein (665aa)
Uncharacterized protein n=13 Tax=root RepID=Q8G785_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24223.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_114_000M1_scaffold_337_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10468..11154)
DNA (687bp) protein (229aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=C5E8V4_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54448.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L3_114_000M1_scaffold_337_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11357..11566
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A739_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82622.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
phage repressor
L3_114_000M1_scaffold_337_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11563..11994
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DU11_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98630.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_114_000M1_scaffold_337_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11991..12434
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AJR7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76584.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_114_000M1_scaffold_337_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12923..13822
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZQF3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76585.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hflC2; membrane protease
L3_114_000M1_scaffold_337_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13834..14016
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=B3DU07_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98626.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_114_000M1_scaffold_337_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14013..14180
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A2Z9_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76587.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L3_114_000M1_scaffold_337_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14532..14771
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZIH9_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76588.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L3_114_000M1_scaffold_337_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14768..15250
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AJS2_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76589.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L3_114_000M1_scaffold_337_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15250..15771
DNA (522bp) protein (174aa)
Single-stranded DNA-binding protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A730_BIFAD
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
ssb1; single-stranded DNA-binding protein
L3_114_000M1_scaffold_337_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15785..16222
DNA (438bp) protein (146aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=B3DU02_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98621.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_114_000M1_scaffold_337_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16308..16529)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=S3A305_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71127.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_114_000M1_scaffold_337_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16565..17569
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZII5_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76593.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L3_114_000M1_scaffold_337_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17566..17970
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AJS9_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76594.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L3_114_000M1_scaffold_337_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17967..18605
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A726_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82609.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Oligoribonuclease (3'->5' exoribonuclease)
L3_114_000M1_scaffold_337_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18602..18835
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CRW1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87250.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_114_000M1_scaffold_337_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18832..19020
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BDV0_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ29543.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_114_000M1_scaffold_337_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19023..19397
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=B3DTZ8_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98617.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_114_000M1_scaffold_337_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19462..19647
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A720_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82603.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_114_000M1_scaffold_337_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19644..19856
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=S3AJT4_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71119.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_114_000M1_scaffold_337_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19853..20188
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A718_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82601.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
Displaying items 1-30 of 71 in total

View Taxonomy