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L3_114_000M1_scaffold_344

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_344_1
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(133..3840)
DNA (3708bp) protein (1236aa)
Ig-like domain-containing surface protein
Chitin binding protein {ECO:0000313|EMBL:AKB30298.1}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae T4/M.;"
Ig-like domain-containing surface protein id=4538411 bin=GWF2_Bacteroidetes_29_10 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
L3_114_000M1_scaffold_344_2
Clostridium sp. CAG:798, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4237..6930)
DNA (2694bp) protein (898aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:798 RepID=R6X3I0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD16165.1}; TaxID=1262841 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:798.;"
lipoprotein
L3_114_000M1_scaffold_344_3
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7585..11364)
DNA (3780bp) protein (1260aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z2L4_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72589.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_000M1_scaffold_344_4
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11914..12639
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z1Q2_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72413.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_000M1_scaffold_344_5
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13315..15744)
DNA (2430bp) protein (810aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z2L4_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72589.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_000M1_scaffold_344_6
Enterococcus durans, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(15790..17763)
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Enterococcus durans ATCC 6056 RepID=S0S2A1_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOU19007.1}; TaxID=1140001 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus durans ATCC 6056.;"
hypothetical protein
L3_114_000M1_scaffold_344_7
Streptococcus ratti, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(17967..20951)
DNA (2985bp) protein (995aa)
Carbohydrate binding module family 13 domain protein n=1 Tax=Streptococcus ratti FA-1 = DSM 20564 RepID=J3AIY8_STRRT
Uncharacterized protein {ECO:0000313|EMBL:EMP71251.1}; TaxID=699248 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus ratti FA-1 = DSM 20564.;"
Bacterial surface proteins containing Ig-like domains
L3_114_000M1_scaffold_344_8
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20984..21775)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5K8Y3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY57646.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
L3_114_000M1_scaffold_344_9
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21798..22547)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L1N3_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK99250.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_114_000M1_scaffold_344_10
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22547..22999)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WMV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC95427.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_114_000M1_scaffold_344_11
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23210..23446
DNA (237bp) protein (79aa)
Helix-turn-helix n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QC47_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CDC33385.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Helix-turn-helix.
L3_114_000M1_scaffold_344_12
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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comp(23607..24320)
DNA (714bp) protein (238aa)
DNA-binding response regulator n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EPR4_9FIRM
DNA-binding response regulator {ECO:0000313|EMBL:CDA98816.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_114_000M1_scaffold_344_13
unknown

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comp(24317..25171)
DNA (855bp) protein (285aa)

This feature has no annotations

L3_114_000M1_scaffold_344_14
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25168..26328)
DNA (1161bp) protein (387aa)
Signal transduction histidine kinase regulating citrate/malate metabolism n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZPE2_9FIRM
Signal transduction histidine kinase regulating citrate/malate metabolism {ECO:0000313|EMBL:CDA38354.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L3_114_000M1_scaffold_344_15
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26416..28548)
DNA (2133bp) protein (711aa)
Fibronectin type III domain protein n=1 Tax=Eubacterium sp. CAG:252 RepID=R6K2W3_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:CDB67800.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
hypothetical protein
L3_114_000M1_scaffold_344_16

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comp(28583..29737)
DNA (1155bp) protein (385aa)
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein n=1 Tax=Clostridium thermocellum JW20 RepID=D1NJF1_CLOTM
Coenzyme F420 hydrogenase/dehydrogenase beta subunit protein {ECO:0000313|EMBL:ETJ38921.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
coenzyme F420-reducing hydrogenase subunit beta
L3_114_000M1_scaffold_344_17

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comp(29759..31309)
DNA (1551bp) protein (517aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium thermocellum JW20 RepID=D1NJF2_CLOTM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ETJ38922.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_114_000M1_scaffold_344_18
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31311..32510)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58657.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
polysaccharide pyruvyl transferase
L3_114_000M1_scaffold_344_19
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(32523..33476)
DNA (954bp) protein (318aa)
epsJ3; putative glycosyltransferase EpsJ (EC:2.4.-.-)
Glycosyltransferase, group 2 family protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QW42_9BACT
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EGG52311.1}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
L3_114_000M1_scaffold_344_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(33481..34815)
DNA (1335bp) protein (445aa)
Polysaccharide polymerase n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp126 RepID=S2R0I4_LACPA
Polysaccharide polymerase {ECO:0000313|EMBL:EPC71712.1}; TaxID=1256206 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp126.;"
L3_114_000M1_scaffold_344_21
Streptococcus gallolyticus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(34838..36796)
DNA (1959bp) protein (653aa)
Glycosyl transferase n=1 Tax=Streptococcus gallolyticus (strain ATCC 43143 / F-1867) RepID=F5X0K3_STRG1
cpsH; glycosyl transferase family protein
Glycosyl transferase {ECO:0000313|EMBL:BAK27814.1}; TaxID=981539 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus gallolyticus (strain ATCC 43143 / F-1867).;"
L3_114_000M1_scaffold_344_22
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(36820..37890)
DNA (1071bp) protein (357aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEF67806.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEF67806.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y890_9FIRM
family 2 glycosyl transferase
L3_114_000M1_scaffold_344_23
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(38076..38750)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B7Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82693.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Displaying 23 items

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