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L3_114_000M1_scaffold_380

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_380_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62..847
DNA (786bp) protein (262aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0H5_9FIRM
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Pleiotropic transcriptional repressor
L3_114_000M1_scaffold_380_2
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1188..1472
DNA (285bp) protein (95aa)
10 kDa chaperonin n=2 Tax=Clostridiales RepID=R5NJM7_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Co-chaperonin GroES (HSP10)
L3_114_000M1_scaffold_380_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1520..3139
DNA (1620bp) protein (540aa)
60 kDa chaperonin n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKA1_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
chaperonin GroL
L3_114_000M1_scaffold_380_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3257..3760
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97498.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_114_000M1_scaffold_380_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3828..5282
DNA (1455bp) protein (485aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6K4_9FIRM
L3_114_000M1_scaffold_380_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5509..6222
DNA (714bp) protein (238aa)
IMP cyclohydrolase-like protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0K0_9FIRM
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:CCY97500.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
IMP cyclohydrolase-like protein.
L3_114_000M1_scaffold_380_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6253..7437
DNA (1185bp) protein (395aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJN5_9FIRM
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) {ECO:0000313|EMBL:CCY97501.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_114_000M1_scaffold_380_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7801..8499)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97502.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_114_000M1_scaffold_380_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8662..9741
DNA (1080bp) protein (360aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1C2_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCY97503.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_114_000M1_scaffold_380_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10142..11326)
DNA (1185bp) protein (395aa)
Uncharacterized oxidoreductases Fe-dependent alcohol dehydrogenase family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6L3_9FIRM
Uncharacterized oxidoreductases Fe-dependent alcohol dehydrogenase family {ECO:0000313|EMBL:CCY97504.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L3_114_000M1_scaffold_380_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11640..12548
DNA (909bp) protein (303aa)
Thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0L0_9FIRM
Thioredoxin reductase {ECO:0000313|EMBL:CCY97505.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_114_000M1_scaffold_380_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12647..12946
DNA (300bp) protein (100aa)
Thioredoxin n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJP0_9FIRM
Thioredoxin {ECO:0000313|EMBL:CCY97506.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
thioredoxin
L3_114_000M1_scaffold_380_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12949..13629)
DNA (681bp) protein (227aa)
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKA9_9FIRM
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases {ECO:0000313|EMBL:CCY97507.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L3_114_000M1_scaffold_380_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13803..15539
DNA (1737bp) protein (579aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1C6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97508.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_114_000M1_scaffold_380_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15526..15633
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6L7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97509.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_114_000M1_scaffold_380_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15644..16258
DNA (615bp) protein (205aa)
Hydrogenase maturation factor n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0L4_9FIRM
Hydrogenase maturation factor {ECO:0000313|EMBL:CCY97510.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Hydrogenase maturation factor
L3_114_000M1_scaffold_380_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16340..16840
DNA (501bp) protein (167aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJP6_9FIRM
L3_114_000M1_scaffold_380_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17010..18419)
DNA (1410bp) protein (470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKB2_9FIRM
Signal transduction histidine kinase
L3_114_000M1_scaffold_380_19
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18416..19117)
DNA (702bp) protein (234aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=3 Tax=Clostridiales RepID=D4LPG6_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL18467.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_114_000M1_scaffold_380_20
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19134..21515)
DNA (2382bp) protein (794aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Endonuclease MutS2 n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LPG7_9FIRM
MutS2 family protein
L3_114_000M1_scaffold_380_21
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21690..21839
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2ECW6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL18469.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_114_000M1_scaffold_380_22
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21823..22770
DNA (948bp) protein (316aa)
Uncharacterized domain HDIG n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GY90_9FIRM
Uncharacterized domain HDIG {ECO:0000313|EMBL:CDE32036.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
uncharacterized domain HDIG
L3_114_000M1_scaffold_380_23
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22774..24411
DNA (1638bp) protein (546aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Blautia sp. KLE 1732 RepID=U2CJ71_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ERI90559.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_114_000M1_scaffold_380_24
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

24465..24815
DNA (351bp) protein (117aa)
Glutathione synthase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AE19_9FIRM
Glutathione synthase {ECO:0000313|EMBL:CCX40963.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
glutathione synthase
L3_114_000M1_scaffold_380_25
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24853..25008)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2R817_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK49773.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_114_000M1_scaffold_380_26
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25304..26254
DNA (951bp) protein (317aa)
2-keto-3-deoxygluconate transporter n=2 Tax=Fusobacterium ulcerans RepID=H1PYF1_9FUSO
2-keto-3-deoxygluconate permease {ECO:0000313|EMBL:KGK89362.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
2-keto-3-deoxygluconate permease
L3_114_000M1_scaffold_380_27
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26323..26979)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KRU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49053.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
transcriptional regulator, GntR family
L3_114_000M1_scaffold_380_28
Mitsuokella sp. oral taxon 131, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27262..28287
DNA (1026bp) protein (342aa)
Putative chlorophyll synthesis pathway protein BchC n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2USK2_9FIRM
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:ERL03421.1}; TaxID=1321781 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella sp. oral taxon 131 str. W9106.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L3_114_000M1_scaffold_380_29
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28310..29800
DNA (1491bp) protein (497aa)
altronate dehydratase (EC:4.2.1.7)
altronate hydrolase n=1 Tax=Blautia producta RepID=UPI00038194C3
SAF domain protein {ECO:0000313|EMBL:ERI69253.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_114_000M1_scaffold_380_30
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

29875..31383
DNA (1509bp) protein (503aa)
Altronate oxidoreductase n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XRK2_9FIRM
Altronate oxidoreductase {ECO:0000313|EMBL:CDA15139.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
mannitol dehydrogenase domain-containing protein
Displaying items 1-30 of 37 in total

View Taxonomy