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L3_114_000M1_scaffold_382

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_382_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..763
DNA (762bp) protein (254aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFN7_9FIRM
L3_114_000M1_scaffold_382_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(849..1379)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08016.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_114_000M1_scaffold_382_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1678..2598
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08019.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
dTDP-glucose pyrophosphorylase
L3_114_000M1_scaffold_382_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2652..5378)
DNA (2727bp) protein (909aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K932_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBL01345.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
diguanylate cyclase (GGDEF) domain
L3_114_000M1_scaffold_382_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5592..6680)
DNA (1089bp) protein (363aa)
Predicted membrane protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K931_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL01344.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_382_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6695..6874)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFK2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01343.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_382_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6867..7643)
DNA (777bp) protein (259aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057, ECO:0000313|EMBL:CBL01342.1};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K929_9FIRM
L3_114_000M1_scaffold_382_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7627..8829)
DNA (1203bp) protein (401aa)
Threonine/alanine tRNA ligase second additional domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFK4_9FIRM
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:EFQ08025.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain
L3_114_000M1_scaffold_382_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9015..10556
DNA (1542bp) protein (514aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFK7_9FIRM
L3_114_000M1_scaffold_382_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10745..11536
DNA (792bp) protein (264aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFK8_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFQ08029.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
diguanylate cyclase (GGDEF) domain
L3_114_000M1_scaffold_382_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11596..12036
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08030.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_114_000M1_scaffold_382_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12185..12868)
DNA (684bp) protein (228aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
MTA/SAH nucleosidase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL0_9FIRM
L3_114_000M1_scaffold_382_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12879..14012)
DNA (1134bp) protein (378aa)
Ribosome-binding ATPase YchF n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL1_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
GTP-binding protein YchF
L3_114_000M1_scaffold_382_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14176..14595)
DNA (420bp) protein (140aa)
Histidine triad domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPV1_9FIRM
Histidine triad domain protein {ECO:0000313|EMBL:EEQ59493.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
histidine triad (HIT) protein
L3_114_000M1_scaffold_382_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15076..15774
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6C4_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDP23030.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_114_000M1_scaffold_382_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15774..17294
DNA (1521bp) protein (507aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL6_9FIRM
Signal transduction histidine kinase
L3_114_000M1_scaffold_382_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17656..18306
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8J4_9FIRM
L3_114_000M1_scaffold_382_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18320..19345
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08039.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfD
L3_114_000M1_scaffold_382_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19342..20067
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08040.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfE
L3_114_000M1_scaffold_382_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20064..20675
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08041.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
L3_114_000M1_scaffold_382_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20692..21795
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08042.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_114_000M1_scaffold_382_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21844..23136
DNA (1293bp) protein (431aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KB07_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL02020.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_382_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23186..25108
DNA (1923bp) protein (641aa)
Superfamily II DNA and RNA helicases (EC:3.6.1.-)
DEAD/DEAH box helicase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM3_9FIRM
DEAD/DEAH box helicase {ECO:0000313|EMBL:EFQ08044.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_114_000M1_scaffold_382_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25105..25950
DNA (846bp) protein (282aa)
Methyltransferase domain. (EC:2.1.1.51)
Methyltransferase domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8I7_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EEU95692.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_114_000M1_scaffold_382_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25990..27348)
DNA (1359bp) protein (453aa)
MATE efflux family protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D8_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL02024.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_382_26
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27490..28413
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q1Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30738.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L3_114_000M1_scaffold_382_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28320..29765)
DNA (1446bp) protein (482aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXL7_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBK98766.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000M1_scaffold_382_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29989..30642
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08046.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted membrane protein
L3_114_000M1_scaffold_382_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31120..32628
DNA (1509bp) protein (503aa)
Amino acid carrier protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG87_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EFQ07811.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
amino acid carrier protein
L3_114_000M1_scaffold_382_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32688..33959)
DNA (1272bp) protein (424aa)
Flavoprotein family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6E4_9FIRM
Flavoprotein family protein {ECO:0000313|EMBL:EDP23048.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Predicted flavoproteins
Displaying items 1-30 of 34 in total

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