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L3_114_000M1_scaffold_386

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_386_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(443..1276)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97625.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_114_000M1_scaffold_386_2
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1290..3434)
DNA (2145bp) protein (715aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00081436}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00081436};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
Alpha-1 4-glucan:alpha-1 4-glucan 6-glycosyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKL3_9FIRM
L3_114_000M1_scaffold_386_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3674..4645
DNA (972bp) protein (324aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97628.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_114_000M1_scaffold_386_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4917..5858)
DNA (942bp) protein (314aa)
manA; mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase class I n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6W8_9FIRM
Mannose-6-phosphate isomerase class I {ECO:0000313|EMBL:CCY97629.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_114_000M1_scaffold_386_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5951..6973)
DNA (1023bp) protein (341aa)
Predicted glycosylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0U2_9FIRM
Predicted glycosylase {ECO:0000313|EMBL:CCY97630.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted glycosylase
L3_114_000M1_scaffold_386_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6975..7217)
DNA (243bp) protein (81aa)
Predicted glycosylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJY8_9FIRM
Predicted glycosylase {ECO:0000313|EMBL:CCY97631.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted glycosylase
L3_114_000M1_scaffold_386_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7196..7831)
DNA (636bp) protein (212aa)
Glycosidase related protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKL8_9FIRM
Glycosidase related protein {ECO:0000313|EMBL:CCY97632.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
glycosidase-like protein
L3_114_000M1_scaffold_386_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7824..8993)
DNA (1170bp) protein (390aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Cellobiose 2-epimerase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1K6_9FIRM
N-acyl-D-glucosamine 2-epimerase
L3_114_000M1_scaffold_386_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9010..9939)
DNA (930bp) protein (310aa)
Putative ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6X1_9FIRM
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCY97634.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_114_000M1_scaffold_386_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10011..10844)
DNA (834bp) protein (278aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0U5_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCY97635.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
L3_114_000M1_scaffold_386_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10958..11320
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97636.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_114_000M1_scaffold_386_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11404..12441)
DNA (1038bp) protein (346aa)
Transcriptional regulators n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKM3_9FIRM
Transcriptional regulators {ECO:0000313|EMBL:CCY97637.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Transcriptional regulators
L3_114_000M1_scaffold_386_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12608..14410)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97638.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
phosphomannomutase
L3_114_000M1_scaffold_386_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14474..15109)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97639.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted integral membrane protein
L3_114_000M1_scaffold_386_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15215..15541)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97640.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_114_000M1_scaffold_386_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15535..15885)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97640.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_114_000M1_scaffold_386_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16120..18306)
DNA (2187bp) protein (729aa)
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJZ7_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CCY97641.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_114_000M1_scaffold_386_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18494..19279)
DNA (786bp) protein (262aa)
Uncharacterized domain HDIG n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKM8_9FIRM
Uncharacterized domain HDIG {ECO:0000313|EMBL:CCY97642.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
uncharacterized domain HDIG
L3_114_000M1_scaffold_386_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19417..20142)
DNA (726bp) protein (242aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1L6_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
RNA polymerase, sigma 29 subunit, SigE
L3_114_000M1_scaffold_386_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20159..21091)
DNA (933bp) protein (311aa)
Sigma-E processing peptidase SpoIIGA n=1 Tax=Blautia sp. KLE 1732 RepID=U2DIK5_9FIRM
Sporulation factor SpoIIGA {ECO:0000313|EMBL:CCY97644.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Sporulation factor SpoIIGA.
L3_114_000M1_scaffold_386_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21310..22176
DNA (867bp) protein (289aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0V3_9FIRM
L3_114_000M1_scaffold_386_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22187..23155)
DNA (969bp) protein (323aa)
Transcriptional regulator ArsR family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NK00_9FIRM
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CCY97646.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ArsR family transcriptional regulator
L3_114_000M1_scaffold_386_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23536..24309
DNA (774bp) protein (258aa)
Glycoside hydrolase family 2 sugar binding protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKN3_9FIRM
Glycoside hydrolase family 2 sugar binding protein {ECO:0000313|EMBL:CCY97647.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
glycoside hydrolase
L3_114_000M1_scaffold_386_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24419..26380)
DNA (1962bp) protein (654aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1L9_9FIRM
L3_114_000M1_scaffold_386_25
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26809..27291)
DNA (483bp) protein (161aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GUT6_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDE31164.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L3_114_000M1_scaffold_386_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27291..27800)
DNA (510bp) protein (170aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0V6_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCY97650.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_114_000M1_scaffold_386_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28068..30581)
DNA (2514bp) protein (838aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NK06_9FIRM
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CCY97651.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_114_000M1_scaffold_386_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30584..30817)
DNA (234bp) protein (78aa)
Phosphotransferase system HPr-related proteins n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKN8_9FIRM
Phosphotransferase system HPr-related proteins {ECO:0000313|EMBL:CCY97652.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Phosphotransferase system, HPr-related proteins
L3_114_000M1_scaffold_386_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30988..32556)
DNA (1569bp) protein (523aa)
Cellobiose phosphorylase (EC:3.2.1.40)
Cellobiose phosphorylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1M3_9FIRM
Cellobiose phosphorylase {ECO:0000313|EMBL:CCY97653.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_114_000M1_scaffold_386_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32556..33941)
DNA (1386bp) protein (462aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6Y6_9FIRM
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CCY97654.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
Displaying items 1-30 of 36 in total

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