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L3_114_000M1_scaffold_417

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_417_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..252)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAF2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01815.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_417_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(498..1736)
DNA (1239bp) protein (413aa)
Uncharacterized protein conserved in bacteria C-term(DUF2220) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K545_9FIRM
Uncharacterized protein conserved in bacteria C-term(DUF2220).
Uncharacterized protein conserved in bacteria C-term(DUF2220) {ECO:0000313|EMBL:CBK98638.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000M1_scaffold_417_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1696..5079)
DNA (3384bp) protein (1128aa)
SMC proteins Flexible Hinge Domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K546_9FIRM
SMC proteins Flexible Hinge Domain {ECO:0000313|EMBL:CBK98639.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
SMC proteins Flexible Hinge Domain.
L3_114_000M1_scaffold_417_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5030..5677)
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SDT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20995.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_114_000M1_scaffold_417_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5674..7074)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ45_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFQ06805.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_114_000M1_scaffold_417_6
unknown

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7415..7528
DNA (114bp) protein (38aa)

This feature has no annotations

L3_114_000M1_scaffold_417_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7906..9294)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06803.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
xaa-Pro aminopeptidase
L3_114_000M1_scaffold_417_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9345..10787)
DNA (1443bp) protein (481aa)
MlrC domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ42_9FIRM
MlrC domain protein {ECO:0000313|EMBL:EFQ06802.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_114_000M1_scaffold_417_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10822..11118)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06801.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_114_000M1_scaffold_417_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11247..12668)
DNA (1422bp) protein (474aa)
Glycosyl hydrolase, family 1 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ40_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EFQ06800.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
glycoside hydrolase
L3_114_000M1_scaffold_417_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12710..14155)
DNA (1446bp) protein (482aa)
MlrC domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ39_9FIRM
MlrC domain protein {ECO:0000313|EMBL:EFQ06799.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
microcystin LR degradation protein MlrC-like protein
L3_114_000M1_scaffold_417_12
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14298..15680)
DNA (1383bp) protein (461aa)
Protein-N(pi)-phosphohistidine--sugar phosphotransferase (EC:2.7.1.69)
Phosphotransferase system, EIIC n=3 Tax=Firmicutes RepID=E4LNL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX75808.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L3_114_000M1_scaffold_417_13
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(16060..16821)
DNA (762bp) protein (254aa)
Putative DeoR family transcriptional regulator n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GW37_SELRL
DeoR family transcriptional regulator
Putative DeoR family transcriptional regulator {ECO:0000313|EMBL:BAL84974.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L3_114_000M1_scaffold_417_14
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16877..17632)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M0V8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64625.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
GntR family transcriptional regulator
L3_114_000M1_scaffold_417_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17818..19269
DNA (1452bp) protein (484aa)
MlrC domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ39_9FIRM
MlrC domain protein {ECO:0000313|EMBL:EFQ06799.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
microcystin LR degradation protein MlrC-like protein
L3_114_000M1_scaffold_417_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19290..20732
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B7X9_9FIRM
MlrC domain protein {ECO:0000313|EMBL:EFR39516.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
microcystin LR degradation protein MlrC-like protein
L3_114_000M1_scaffold_417_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20946..21827)
DNA (882bp) protein (294aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SDU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21002.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Putative transposase, YhgA-like.
L3_114_000M1_scaffold_417_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22069..22935)
DNA (867bp) protein (289aa)
Transposase, IS4 family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEM4_9FIRM
Transposase, IS4 family {ECO:0000313|EMBL:EDS09807.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
transposase
L3_114_000M1_scaffold_417_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23033..23239)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27721.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_114_000M1_scaffold_417_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23242..25950)
DNA (2709bp) protein (903aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HP84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27722.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_114_000M1_scaffold_417_21

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comp(26247..27620)
DNA (1374bp) protein (458aa)
Transposase n=1 Tax=Clostridium sp. enrichment culture clone 7-14 RepID=C0KTB1_9CLOT
Uncultured bacterium extrachromosomal DNA RGI01615 {ECO:0000313|EMBL:CDL66568.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative transposase for insertion sequence element
L3_114_000M1_scaffold_417_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27798..29090)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8RI31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19143.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
C4-dicarboxylate transport system (Permease large protein)
L3_114_000M1_scaffold_417_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29087..29596)
DNA (510bp) protein (170aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9YIV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51923.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
C4-dicarboxylate ABC transporter, permease protein
L3_114_000M1_scaffold_417_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29641..30696)
DNA (1056bp) protein (352aa)
DctP family TRAP transporter solute receptor n=1 Tax=Clostridium bolteae 90B8 RepID=R0AC60_9CLOT
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:ENZ33998.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
TRAP dicarboxylate family transporter subunit DctP
L3_114_000M1_scaffold_417_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30894..31658)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57254.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
GntR family transcriptional regulator
L3_114_000M1_scaffold_417_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32037..32675
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9Z2T3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ33995.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
aldolase
L3_114_000M1_scaffold_417_27
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32701..34212
DNA (1512bp) protein (504aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0AIJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51926.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
xylB; xylulose kinase
L3_114_000M1_scaffold_417_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34356..34880)
DNA (525bp) protein (175aa)
Dipeptidase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K544_9FIRM
Dipeptidase
Dipeptidase {ECO:0000313|EMBL:CBK98637.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying 28 items

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