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L3_114_000M1_scaffold_447

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_447_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..580
DNA (579bp) protein (193aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ66_9FIRM
L3_114_000M1_scaffold_447_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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674..1618
DNA (945bp) protein (315aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
tRNA-dihydrouridine synthase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ65_9FIRM
tRNA-dihydrouridine synthase
L3_114_000M1_scaffold_447_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1817..2062)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06793.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_114_000M1_scaffold_447_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2224..2631
DNA (408bp) protein (136aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
phosphopantethiene--protein transferase domain (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ63_9FIRM
L3_114_000M1_scaffold_447_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2768..3118
DNA (351bp) protein (117aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
mRNA interferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ62_9FIRM
Growth inhibitor
L3_114_000M1_scaffold_447_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3392..4528
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ60_9FIRM
L3_114_000M1_scaffold_447_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4568..5179
DNA (612bp) protein (204aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ59_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFQ06788.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Response regulator of the LytR/AlgR family
L3_114_000M1_scaffold_447_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5151..5957
DNA (807bp) protein (269aa)
Histidine kinase-DNA gyrase B-and HSP90-like ATPase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BRY2_9FIRM
Histidine kinase-DNA gyrase B-and HSP90-like ATPase {ECO:0000313|EMBL:CDA55997.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_114_000M1_scaffold_447_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6084..6641
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I4B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31596.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_114_000M1_scaffold_447_10
unknown

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comp(6676..6972)
DNA (297bp) protein (99aa)

This feature has no annotations

L3_114_000M1_scaffold_447_11
unknown

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7039..7215
DNA (177bp) protein (59aa)

This feature has no annotations

L3_114_000M1_scaffold_447_12
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7254..7697
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei Lpc-37 RepID=K6S3Z6_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EHO16010.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
hypothetical protein
L3_114_000M1_scaffold_447_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8156..9016)
DNA (861bp) protein (287aa)
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVY5_9FIRM
CRISPR-associated endoribonuclease Cas2 {ECO:0000313|EMBL:ERJ96452.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
CRISPR-associated protein Cas2, E. coli subfamily
L3_114_000M1_scaffold_447_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9025..9975)
DNA (951bp) protein (317aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ55_9FIRM
CRISPR-associated protein, Cas1 family
L3_114_000M1_scaffold_447_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9977..10609)
DNA (633bp) protein (211aa)
CRISPR-associated protein, Cse3 family n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAG5_9FIRM
CRISPR-associated protein, Cse3 family
CRISPR-associated protein, Cse3 family {ECO:0000313|EMBL:CBL01828.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_447_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10625..11287)
DNA (663bp) protein (221aa)
CRISPR system CASCADE complex protein CasD n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ53_9FIRM
CRISPR system CASCADE complex protein CasD {ECO:0000313|EMBL:EFQ06782.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
CRISPR-associated protein, Cas5e family
L3_114_000M1_scaffold_447_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11287..12345)
DNA (1059bp) protein (353aa)
CRISPR system CASCADE complex protein CasC n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ52_9FIRM
CRISPR system CASCADE complex protein CasC {ECO:0000313|EMBL:EFQ06781.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
CRISPR-associated protein, Cse4 family
L3_114_000M1_scaffold_447_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12348..12965)
DNA (618bp) protein (206aa)
CRISPR system CASCADE complex protein CasB n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ51_9FIRM
CRISPR system CASCADE complex protein CasB {ECO:0000313|EMBL:EFQ06780.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
CRISPR-associated protein, Cse2 family
L3_114_000M1_scaffold_447_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12978..14612)
DNA (1635bp) protein (545aa)
CRISPR system CASCADE complex protein CasA n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ50_9FIRM
CRISPR system CASCADE complex protein CasA {ECO:0000313|EMBL:EFQ06779.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
CRISPR-associated protein, Cse1 family
L3_114_000M1_scaffold_447_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14599..17313)
DNA (2715bp) protein (905aa)
CRISPR-associated helicase Cas3 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ49_9FIRM
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:EFQ06778.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
CRISPR-associated helicase Cas3
L3_114_000M1_scaffold_447_21
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17852..18547)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6GB40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB21535.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
L3_114_000M1_scaffold_447_22
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(18544..19842)
DNA (1299bp) protein (433aa)
Putative ATP-binding protein involved in virulence n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CFF3_9FIRM
Putative ATP-binding protein involved in virulence {ECO:0000313|EMBL:CDA63962.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
SMC domain protein
L3_114_000M1_scaffold_447_23
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(19952..20224)
DNA (273bp) protein (91aa)
Type I restriction enzyme HsdR protein N-terminal domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CEO89559.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
hypothetical protein
L3_114_000M1_scaffold_447_24
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(20450..23185)
DNA (2736bp) protein (912aa)
Putative type III restriction-modification system, res subunit n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RK73_ACIFV
Putative type III restriction-modification system, res subunit {ECO:0000313|EMBL:ADB47475.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4).;"
putative type III restriction-modification system, res subunit
L3_114_000M1_scaffold_447_25
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(23169..24893)
DNA (1725bp) protein (575aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RK74_ACIFV
DNA methylase N-4/N-6 domain-containing protein
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:ADB47476.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4).;"
L3_114_000M1_scaffold_447_26
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(24878..25711)
DNA (834bp) protein (278aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RK74_ACIFV
DNA methylase N-4/N-6 domain-containing protein
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:ADB47476.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4).;"
L3_114_000M1_scaffold_447_27
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(25729..27774)
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y770_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12243.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_114_000M1_scaffold_447_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28235..29185)
DNA (951bp) protein (317aa)
Site-specific recombinases, DNA invertase Pin homologs n=2 Tax=Faecalibacterium prausnitzii RepID=D4K710_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFQ06730.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_114_000M1_scaffold_447_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29248..29556)
DNA (309bp) protein (103aa)
Putative phage-type endonuclease n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAD2_9FIRM
putative phage-type endonuclease
Putative phage-type endonuclease {ECO:0000313|EMBL:CBL01795.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_447_30
unknown

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comp(29563..29667)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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