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L3_114_000M1_scaffold_467

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_467_1
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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228..539
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=8 Tax=Firmicutes RepID=E2SIS6_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
rplU; 50S ribosomal protein L21
L3_114_000M1_scaffold_467_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

543..857
DNA (315bp) protein (105aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LNZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ53686.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000M1_scaffold_467_3
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


860..1144
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=8 Tax=Firmicutes RepID=E2SIS8_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
LSU ribosomal protein L27P
L3_114_000M1_scaffold_467_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1214..2503
DNA (1290bp) protein (430aa)
GTPase Obg n=6 Tax=Firmicutes RepID=E4LP00_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Obg family GTPase CgtA
L3_114_000M1_scaffold_467_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2802..3230)
DNA (429bp) protein (143aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LP01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ53690.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000M1_scaffold_467_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3291..4364
DNA (1074bp) protein (358aa)
Kinase domain protein n=2 Tax=Firmicutes RepID=E4LP02_9CLOT
Kinase domain protein {ECO:0000313|EMBL:EFR39331.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Protein kinase domain.
L3_114_000M1_scaffold_467_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4422..5180
DNA (759bp) protein (253aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LP03_9CLOT
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:EQJ53692.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Protein kinase domain.
L3_114_000M1_scaffold_467_8
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5224..5793
DNA (570bp) protein (190aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LP04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO29019.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Telomeric repeat-binding factor 2
L3_114_000M1_scaffold_467_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5921..6685
DNA (765bp) protein (255aa)
Exodeoxyribonuclease III n=3 Tax=Firmicutes RepID=E4LP05_9CLOT
Exodeoxyribonuclease III {ECO:0000313|EMBL:CDC84173.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
exodeoxyribonuclease III
L3_114_000M1_scaffold_467_10
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6905..7489
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LP06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR39503.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_467_11
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7978..8559
DNA (582bp) protein (194aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Holliday junction ATP-dependent DNA helicase RuvA n=7 Tax=Firmicutes RepID=E4LP07_9CLOT
Holliday junction DNA helicase subunit RuvA
L3_114_000M1_scaffold_467_12
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8563..9576
DNA (1014bp) protein (338aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Clostridiales RepID=E4LP08_9CLOT
ruvB; Holliday junction ATP-dependent DNA helicase RuvB
L3_114_000M1_scaffold_467_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9578..9931)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LP09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR39498.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_467_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9995..10657
DNA (663bp) protein (221aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LP10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ53701.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_114_000M1_scaffold_467_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10654..11949)
DNA (1296bp) protein (432aa)
Polysaccharide biosynthesis family protein n=1 Tax=Clostridium difficile P28 RepID=T4NEM9_CLODI
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:EQJ53702.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
stage V sporulation protein B
L3_114_000M1_scaffold_467_16
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12100..12390
DNA (291bp) protein (97aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LP12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85880.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_114_000M1_scaffold_467_17
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12387..14678
DNA (2292bp) protein (764aa)
Export membrane protein SecD n=1 Tax=Clostridium sp. HGF2 RepID=E4LP13_9CLOT
Export membrane protein SecD {ECO:0000313|EMBL:EFR39320.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
bifunctional preprotein translocase subunit SecD/SecF
L3_114_000M1_scaffold_467_18
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14771..16378
DNA (1608bp) protein (536aa)
putative single-strand DNA-specific exonuclease (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=4 Tax=Firmicutes RepID=H1AZW6_9FIRM
Putative single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EFR39417.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_114_000M1_scaffold_467_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16440..16955
DNA (516bp) protein (172aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
apt; Adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=4 Tax=Firmicutes RepID=E4LP15_9CLOT
L3_114_000M1_scaffold_467_20
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16984..19203
DNA (2220bp) protein (740aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VP16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX76040.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L3_114_000M1_scaffold_467_21
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19244..19744
DNA (501bp) protein (167aa)
Acetyltransferase, GNAT family n=2 Tax=Firmicutes RepID=E4LP17_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFR39375.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_114_000M1_scaffold_467_22
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19810..20178
DNA (369bp) protein (123aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1AZX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29033.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_114_000M1_scaffold_467_23
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20214..20642
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LP19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR39406.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_114_000M1_scaffold_467_24
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20976..21095
DNA (120bp) protein (40aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LP21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC84096.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_114_000M1_scaffold_467_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21092..21565
DNA (474bp) protein (158aa)
Acetyltransferase, GNAT family n=2 Tax=Firmicutes RepID=E4LP22_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFR39350.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
N-acetyltransferase GCN5
L3_114_000M1_scaffold_467_26
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21550..22431
DNA (882bp) protein (294aa)
4Fe-4S binding domain protein n=2 Tax=Firmicutes RepID=E4LP23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO29037.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
4Fe-4S ferredoxin
L3_114_000M1_scaffold_467_27
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22518..23009
DNA (492bp) protein (164aa)
Lincosamide resistance family protein n=2 Tax=Firmicutes RepID=E4LP24_9CLOT
Lincosamide resistance family protein {ECO:0000313|EMBL:EFR39478.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
lincosamide resistance protein
L3_114_000M1_scaffold_467_28
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23236..23814)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LP25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR39324.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_114_000M1_scaffold_467_29
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23811..24917)
DNA (1107bp) protein (369aa)
UPF0348 protein HMPREF9406_1909 n=1 Tax=Clostridium sp. HGF2 RepID=E4LP26_9CLOT
UPF0348 protein HMPREF9406_1909 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_114_000M1_scaffold_467_30
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25077..26015
DNA (939bp) protein (313aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LP27_9CLOT
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EFR39511.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Lysophospholipase
Displaying items 1-30 of 39 in total

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