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L3_114_000M1_scaffold_494

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_494_1
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..243)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JLR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS35150.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Site-specific recombinase XerD
L3_114_000M1_scaffold_494_2
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(943..1482)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BHP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO19996.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Predicted transcriptional regulators
L3_114_000M1_scaffold_494_3
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1653..1856
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZFU6_9CLOT
Cro/C1-type HTH DNA-binding domain {ECO:0000313|EMBL:EXG84090.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
L3_114_000M1_scaffold_494_4
unknown

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1914..2093
DNA (180bp) protein (60aa)

This feature has no annotations

L3_114_000M1_scaffold_494_5
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2090..2281
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6KXS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB78295.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
hypothetical protein
L3_114_000M1_scaffold_494_6
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2250..3107
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BMV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA62309.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
replisome organizer, phage associated protein
L3_114_000M1_scaffold_494_7
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3104..3682
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WTJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL12518.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
hypothetical protein
L3_114_000M1_scaffold_494_8
unknown

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3704..4021
DNA (318bp) protein (106aa)

This feature has no annotations

L3_114_000M1_scaffold_494_9
unknown

Not on your lists

4127..4417
DNA (291bp) protein (97aa)

This feature has no annotations

L3_114_000M1_scaffold_494_10
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4501..4650
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S021_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC48681.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_114_000M1_scaffold_494_11
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4970..5422
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KDK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44296.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L3_114_000M1_scaffold_494_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5426..6283
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N483_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF39232.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_114_000M1_scaffold_494_13
unknown

Not on your lists

6356..6484
DNA (129bp) protein (43aa)

This feature has no annotations

L3_114_000M1_scaffold_494_14
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6493..6654
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RDZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC47098.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_114_000M1_scaffold_494_15
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6680..6976
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BXA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60148.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
L3_114_000M1_scaffold_494_16
unknown

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6984..7601
DNA (618bp) protein (206aa)

This feature has no annotations

L3_114_000M1_scaffold_494_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7885..8265
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XHY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY99307.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
endoribonuclease L-PSP
L3_114_000M1_scaffold_494_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8376..10766
DNA (2391bp) protein (797aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AQM8_9CLOT
L3_114_000M1_scaffold_494_19
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10893..11174
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B076_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56212.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_114_000M1_scaffold_494_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11299..12702
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 PF6_9CLOT">RepID=R5IPF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44023.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
TrmA family RNA methyltransferase
L3_114_000M1_scaffold_494_21
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12689..14125)
DNA (1437bp) protein (479aa)
Resolvase N-terminal domain protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BTR7_9FIRM
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CCX56117.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
resolvase, N terminal domain protein
L3_114_000M1_scaffold_494_22
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14328..14726)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N1ZRS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ19742.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L3_114_000M1_scaffold_494_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14913..15110
DNA (198bp) protein (66aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AY24_RUMGN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDN79421.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transcriptional regulator, XRE family
L3_114_000M1_scaffold_494_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15406..15765)
DNA (360bp) protein (120aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AY26_RUMGN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDN79423.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
XRE family transcriptional regulator
L3_114_000M1_scaffold_494_25
unknown

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15914..16168
DNA (255bp) protein (85aa)

This feature has no annotations

L3_114_000M1_scaffold_494_26
unknown

Not on your lists

16424..16585
DNA (162bp) protein (54aa)

This feature has no annotations

L3_114_000M1_scaffold_494_27
unknown

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16598..16750
DNA (153bp) protein (51aa)

This feature has no annotations

L3_114_000M1_scaffold_494_28
unknown

Not on your lists

16847..17281
DNA (435bp) protein (145aa)

This feature has no annotations

L3_114_000M1_scaffold_494_29
unknown

Not on your lists

17278..17493
DNA (216bp) protein (72aa)

This feature has no annotations

L3_114_000M1_scaffold_494_30
unknown

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17465..17659
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

View Taxonomy