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L3_114_000M1_scaffold_680

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_680_1
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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52..765
DNA (714bp) protein (238aa)
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) n=1 Tax=Clostridium sp. CAG:81 RepID=R5FZI1_9CLOT
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) {ECO:0000313|EMBL:CCY10278.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
L3_114_000M1_scaffold_680_2
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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977..1453
DNA (477bp) protein (159aa)
Predicted dehydrogenase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G322_9CLOT
Predicted dehydrogenase {ECO:0000313|EMBL:CCY10279.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Predicted dehydrogenase
L3_114_000M1_scaffold_680_3
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1479..2384
DNA (906bp) protein (302aa)
Predicted dehydrogenase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GRZ5_9FIRM
Predicted dehydrogenase
Predicted dehydrogenase {ECO:0000313|EMBL:CCY10279.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_114_000M1_scaffold_680_4
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2402..3670
DNA (1269bp) protein (423aa)
Thioredoxin reductase (EC:1.5.3.1)
Thioredoxin reductase {ECO:0000313|EMBL:CBL40572.1}; EC=1.5.3.1 {ECO:0000313|EMBL:CBL40572.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Thioredoxin reductase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GRZ6_9FIRM
L3_114_000M1_scaffold_680_5
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3710..4039
DNA (330bp) protein (110aa)
Uncharacterized protein with conserved CXXC pairs n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GRZ7_9FIRM
Uncharacterized protein with conserved CXXC pairs
Uncharacterized protein with conserved CXXC pairs {ECO:0000313|EMBL:CBL40573.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_680_6
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4241..6178)
DNA (1938bp) protein (646aa)
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685, ECO:0000313|EMBL:CBL40575.1};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GRZ9_9FIRM
L3_114_000M1_scaffold_680_7
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6182..7519)
DNA (1338bp) protein (446aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Glycosidases n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS00_9FIRM
Glycosidases
L3_114_000M1_scaffold_680_8
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7525..7764)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5FYX2_9CLOT
Protein of unknown function (DUF2508).
Uncharacterized protein {ECO:0000313|EMBL:CCY10285.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_114_000M1_scaffold_680_9
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7935..8270)
DNA (336bp) protein (112aa)
Predicted transcriptional regulators n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS02_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL40578.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_680_10
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8837..9217
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GBT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10287.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
peptidase A24A prepilin type IV
L3_114_000M1_scaffold_680_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9312..10328
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS03_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40579.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_680_12
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10316..11554
DNA (1239bp) protein (413aa)
Flp pilus assembly protein ATPase CpaF n=1 Tax=Clostridium sp. CAG:81 RepID=R5G329_9CLOT
Flp pilus assembly protein ATPase CpaF {ECO:0000313|EMBL:CCY10289.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Flp pilus assembly protein, ATPase CpaF
L3_114_000M1_scaffold_680_13
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11535..12281
DNA (747bp) protein (249aa)
Type II secretion system F domain protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FYX7_9CLOT
Type II secretion system F domain protein {ECO:0000313|EMBL:CCY10290.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
type II secretion system F domain-containing protein
L3_114_000M1_scaffold_680_14
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12305..13504
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS05_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40581.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_680_15
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13564..13767
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5GBT7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY10292.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_114_000M1_scaffold_680_16
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13768..15624
DNA (1857bp) protein (619aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS07_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40583.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_680_17
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15773..16684
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS08_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40584.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_680_18
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16681..17112
DNA (432bp) protein (144aa)
Type IV leader peptidase family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS09_9FIRM
Type IV leader peptidase family.
Type IV leader peptidase family {ECO:0000313|EMBL:CBL40585.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_680_19
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17109..17522
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GCR4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10296.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_114_000M1_scaffold_680_20
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17561..18985
DNA (1425bp) protein (475aa)
FOG: FHA domain n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS12_9FIRM
FOG: FHA domain
FOG: FHA domain {ECO:0000313|EMBL:CBL40588.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_680_21
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19038..20198
DNA (1161bp) protein (387aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FZK1_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CCY10298.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_114_000M1_scaffold_680_22
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20212..20841
DNA (630bp) protein (210aa)
Uncharacterized membrane protein (Homolog of Drosophila rhomboid) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS14_9FIRM
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Uncharacterized membrane protein (Homolog of Drosophila rhomboid) {ECO:0000313|EMBL:CCY10299.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_114_000M1_scaffold_680_23
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20838..21254
DNA (417bp) protein (139aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases n=2 Tax=Clostridiales RepID=D7GS15_9FIRM
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases {ECO:0000313|EMBL:CCY10300.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_114_000M1_scaffold_680_24
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21281..21826
DNA (546bp) protein (182aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS16_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL40592.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_680_25
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21817..22902)
DNA (1086bp) protein (362aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Clostridium sp. CAG:81 RepID=R5GBU7_9CLOT
L3_114_000M1_scaffold_680_26
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23002..23883
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS18_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40594.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_680_27
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23951..24481
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G343_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10304.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_114_000M1_scaffold_680_28
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24696..24944)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5FYZ2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40596.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_680_29
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25402..26094
DNA (693bp) protein (231aa)
methylthioadenosine nucleosidase (EC:3.2.2.16 3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196, ECO:0000313|EMBL:CBL40597.1};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Methylthioadenosine nucleosidase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS21_9FIRM
L3_114_000M1_scaffold_680_30
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26307..27437
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GS22_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40598.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Displaying items 1-30 of 34 in total

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