ggKbase home page

L3_114_000M1_scaffold_726

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_726_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1423
DNA (1422bp) protein (474aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Glutamate--tRNA ligase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BLZ9_BIFBR
Glutamyl-tRNA synthetase
L3_114_000M1_scaffold_726_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1981..2172)
DNA (192bp) protein (64aa)
Glutamate--tRNA ligase n=2 Tax=Bifidobacterium breve RepID=D4BM00_BIFBR
Glutamyl-tRNA synthetase {ECO:0000313|EMBL:EPD76506.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Glutamyl-tRNA synthetase
L3_114_000M1_scaffold_726_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2165..2425)
DNA (261bp) protein (87aa)
integrase n=1 Tax=Bifidobacterium breve RepID=UPI00037F796D
DNA integration/recombination/inversion protein
DNA integration/recombination/inversion protein {ECO:0000313|EMBL:AHJ18523.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_114_000M1_scaffold_726_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2407..2685)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BM01_BIFBR
DNA integration/recombination/inversion protein
Phage integrase {ECO:0000313|EMBL:BAQ99211.1}; Uncharacterized protein {ECO:0000313|EMBL:EFE89820.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_114_000M1_scaffold_726_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3047..4354
DNA (1308bp) protein (436aa)
Phage integrase family protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXN6_BIFLJ
DNA integration/recombination/inversion protein
DNA integration/recombination/inversion protein {ECO:0000313|EMBL:AHJ18524.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_114_000M1_scaffold_726_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4331..4978)
DNA (648bp) protein (216aa)
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ18525.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_114_000M1_scaffold_726_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5186..5710)
DNA (525bp) protein (175aa)
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ18526.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_114_000M1_scaffold_726_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5877..8420)
DNA (2544bp) protein (848aa)
Type III restriction enzyme, res subunit family n=2 Tax=Vibrio mimicus RepID=G0STC9_VIBMI
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:AHJ18527.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
type III restriction enzyme, res subunit
L3_114_000M1_scaffold_726_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8424..10535)
DNA (2112bp) protein (704aa)
hypothetical protein n=1 Tax=Vibrio cyclitrophicus RepID=UPI0002E6770B
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:AHJ18528.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
DNA methylase N-4/N-6 domain protein
L3_114_000M1_scaffold_726_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10685..11017
DNA (333bp) protein (111aa)
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ18529.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_114_000M1_scaffold_726_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11118..11393
DNA (276bp) protein (92aa)
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ18530.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_114_000M1_scaffold_726_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11383..12573
DNA (1191bp) protein (397aa)
FtsK/SpoIIIE family protein n=1 Tax=Mycobacterium abscessus subsp. bolletii 50594 RepID=R4UII1_MYCAB
FtsK/SpoIIIE family protein
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:AHJ18531.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_114_000M1_scaffold_726_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12736..13929
DNA (1194bp) protein (398aa)
Putative replication protein RepA n=1 Tax=Bifidobacterium pseudocatenulatum RepID=Q8RPR8_9BIFI
putative replication protein RepA
Putative replication protein RepA {ECO:0000313|EMBL:AHJ18532.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_114_000M1_scaffold_726_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14578..16494
DNA (1917bp) protein (639aa)
Iron permease FTR1 family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DXM0_BIFBR
Putative membrane spanning protein with iron permease FTR1 family domain {ECO:0000313|EMBL:AHJ18533.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
putative membrane spanning protein with iron permease FTR1 family domain
L3_114_000M1_scaffold_726_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16606..17301
DNA (696bp) protein (232aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C6J9_BIFBA
putative secreted protein, probably involved in iron uptake
Uncharacterized protein {ECO:0000313|EMBL:AEF28124.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_114_000M1_scaffold_726_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17462..18730
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BM04_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ18535.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_114_000M1_scaffold_726_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18753..20000
DNA (1248bp) protein (416aa)
Permease protein of ABC transporter system n=3 Tax=Bifidobacterium breve RepID=F9Y0M1_BIFBU
Permease protein of ABC transporter system
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERI84603.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_114_000M1_scaffold_726_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20033..21427
DNA (1395bp) protein (465aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6K2_BIFBA
efflux ABC transporter permease
Permease protein of ABC transporter system {ECO:0000313|EMBL:AHJ20450.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_114_000M1_scaffold_726_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21443..22240
DNA (798bp) protein (266aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6K3_BIFBA
ATP-binding protein of ABC transporter system
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AEF26569.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_114_000M1_scaffold_726_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22306..22857
DNA (552bp) protein (184aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C6K4_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89827.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_114_000M1_scaffold_726_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23116..23688)
DNA (573bp) protein (191aa)
Transcriptional regulator, TetR family n=4 Tax=Bifidobacterium breve RepID=F9Y0M5_BIFBU
Transcriptional regulator, TetR family
Uncharacterized protein {ECO:0000313|EMBL:EPD76515.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_114_000M1_scaffold_726_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23804..25966)
DNA (2163bp) protein (721aa)
YhgE/Pip domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6K6_BIFBA
YhgE/Pip domain protein {ECO:0000313|EMBL:AEF28128.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
hypothetical protein
L3_114_000M1_scaffold_726_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25963..28587)
DNA (2625bp) protein (875aa)
YhgE/Pip domain protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BM12_BIFBR
phage infection protein-like protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ99221.1}; YhgE/Pip domain protein {ECO:0000313|EMBL:EFE89831.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_114_000M1_scaffold_726_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29081..30439
DNA (1359bp) protein (453aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=D4BM14_BIFBR
Hypothetical membrane spanning protein with DUF1113 domain
Hypothetical membrane spanning protein with DUF1113 domain {ECO:0000313|EMBL:AHJ18543.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_114_000M1_scaffold_726_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30640..32094
DNA (1455bp) protein (485aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
6-phosphogluconate dehydrogenase, decarboxylating n=5 Tax=Bifidobacterium breve RepID=F6C6K9_BIFBA
6-phosphogluconate dehydrogenase
L3_114_000M1_scaffold_726_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32295..33137)
DNA (843bp) protein (281aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase n=2 Tax=Bifidobacterium breve RepID=H3KYM5_BIFBR
6-phosphogluconolactonase {ECO:0000313|EMBL:EPD76520.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_114_000M1_scaffold_726_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33260..34282)
DNA (1023bp) protein (341aa)
Glucose-6-phosphate dehydrogenase subunit n=5 Tax=Bifidobacterium breve RepID=F9Y0N1_BIFBU
glucose-6-phosphate dehydrogenase subunit
Putative opcA protein {ECO:0000313|EMBL:AEF26531.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_114_000M1_scaffold_726_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34279..35817)
DNA (1539bp) protein (513aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0N2_BIFBU
Glucose-6-phosphate 1-dehydrogenase
L3_114_000M1_scaffold_726_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36286..37977
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6L3_BIFBA
Uncharacterized protein {ECO:0000313|EMBL:AEF26685.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
hypothetical protein
L3_114_000M1_scaffold_726_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38207..39727
DNA (1521bp) protein (507aa)
peptidase C69 n=1 Tax=Bifidobacterium breve RepID=UPI00031DD394
Dipeptidase A {ECO:0000313|EMBL:AHJ18549.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Dipeptidase A
Displaying items 1-30 of 33 in total

View Taxonomy